RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 PKIBQ9C010 78 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 DCAF13Q9NV06 445 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 TECRQ9NZ01 308 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF319Q9P2F9 582 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 PSMC3IPQ9P2W1 217 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF107Q9UII5 783 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 RIMS3Q9UJD0 308 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 SLC22A13Q9Y226 551 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 FOXA2Q9Y261 457 aaPredicted RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 POLR1DQ9Y2S0 133 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 UTP11Q9Y3A2 253 aaKnown RBP1.62□□□□□ -2.15
PTCH1-223ENST00000551623 FIS1Q9Y3D6 152 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 NUBP2Q9Y5Y2 271 aa1.62□□□□□ -2.15
PTCH1-223ENST00000551623 TRAV27A0A087WT01 109 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TRGV10A0A0A0MS01 117 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TRAV25A0A0B4J276 109 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 KBTBD11-OT1A0A1B0GTJ5 212 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM120BA0PK00 339 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 DHRS7CA6NNS2 312 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 A8MWP6 167 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 G3V318 75 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 M0QX08 132 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 HSD17B6O14756 317 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TGOLN2O43493 480 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 IDH3BO43837 385 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 NXPH2O95156 264 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 NDUFB2O95178 105 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 IL1AP01583 271 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 GAPDHP04406 335 aaKnown RBP1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SPARCP09486 303 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PSKH1P11801 424 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 IDO1P14902 403 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 LBPP18428 481 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 ALDH3A1P30838 453 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SLC6A6P31641 620 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OPRL1P41146 370 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SLC15A1P46059 708 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR3A1P47881 315 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 GPM6AP51674 278 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 F2RL1P55085 397 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 EDDM3BP56851 147 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 GMFBP60983 142 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 GRB2P62993 217 aaKnown RBP1.61□□□□□ -2.15
PTCH1-223ENST00000551623 NDPQ00604 133 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 ST3GAL3Q11203 375 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 DIAPH2-AS1Q14236 149 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 HES1Q14469 280 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 C17orf58Q2M2W7 97 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM30BQ3MIR4 351 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 ZBED5Q49AG3 693 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SPIN3Q5JUX0 258 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 GCNT6Q5T4J0 391 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PRAMEF5Q5TYX0 476 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 ZNF343Q6P1L6 599 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 HAGHLQ6PII5 290 aaPredicted RBP1.61□□□□□ -2.15
PTCH1-223ENST00000551623 DPY19L2P2Q6ZN68 376 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 MOB3CQ70IA8 216 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 C5orf24Q7Z6I8 188 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OAFQ86UD1 273 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 LINC00346Q8IVM7 164 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OFCC1Q8IZS5 231 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 LINC00311Q8N616 119 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 ASCC1Q8N9N2 400 aaKnown RBP1.61□□□□□ -2.15
PTCH1-223ENST00000551623 Q8NAQ8 132 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SMYD1Q8NB12 490 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SLC24A4Q8NFF2 622 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 NPBQ8NG41 125 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR2AK2Q8NG84 335 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR13A1Q8NGR1 328 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR13C5Q8NGS8 318 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR13C2Q8NGS9 318 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR2AJ1Q8NGZ0 328 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OR51A7Q8NH64 312 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 MRGPRDQ8TDS7 321 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TMEM170AQ8WVE7 144 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 RNF133Q8WVZ7 376 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 RTN4IP1Q8WWV3 396 aaPredicted RBP1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SNAPC3Q92966 411 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TAMM41Q96BW9 452 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 RCN3Q96D15 328 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PRRC1Q96M27 445 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 TSSK2Q96PF2 358 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 RASL11BQ9BPW5 248 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 OSBPL10Q9BXB5 764 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 CST11Q9H112 138 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 ANKRD19PQ9H560 264 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 NIPAL2Q9H841 368 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PPCSQ9HAB8 311 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 RHCGQ9UBD6 479 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PEMTQ9UBM1 199 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 NOL12Q9UGY1 213 aaKnown RBP eCLIP1.61□□□□□ -2.15
PTCH1-223ENST00000551623 COPS3Q9UNS2 423 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 B9D1Q9UPM9 204 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SLC7A11Q9UPY5 501 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 DHDHQ9UQ10 334 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PSG11Q9UQ72 335 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 PIGLQ9Y2B2 252 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 SAR1BQ9Y6B6 198 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 DSCAML1Q8TD84 2053 aa1.61□□□□□ -2.15
PTCH1-223ENST00000551623 DYNC1H1Q14204 4646 aaKnown RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms