RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 LRRTM1Q86UE6 522 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 ZDHHC22Q8N966 263 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 CLEC18CQ8NCF0 446 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 PTPRQQ9UMZ3 2332 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 LOC105371242A0A075B767 164 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 ZIC3O60481 467 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 OPN1MWP04001 364 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 FGF2P09038 288 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 OPN1MW2P0DN77 364 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 OPN1MW3P0DN78 364 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 H3F3AP84243 136 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 TMEM104Q8NE00 496 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 DYNLRB2Q8TF09 96 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 NEIL1Q96FI4 390 aaPredicted RBP10.55□□□□□ -0.72
NR4A1-215ENST00000550557 MAGT1Q9H0U3 335 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 PSENENQ9NZ42 101 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 SCN2AQ99250 2005 aa10.55□□□□□ -0.72
NR4A1-215ENST00000550557 HEATR5BQ9P2D3 2071 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 TCF15Q12870 199 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 ETFRF1Q6IPR1 90 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 ZNF488Q96MN9 340 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 GAB2Q9UQC2 676 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 CREBBPQ92793 2442 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 NEURL1O76050 574 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 TXNDC12O95881 172 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 IGF2P01344 180 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 OR13C7P0DN81 318 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 COX5BP10606 129 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
NR4A1-215ENST00000550557 ECSCRQ19T08 205 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 CEACAM21Q3KPI0 293 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 ZNF826PQ6ZT77 177 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 LINC00470Q9BZP3 86 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 PPIAL4CA0A0B4J2A2 164 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 SHISA3A0PJX4 238 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 COX7A2P2O60397 106 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 OR7C2O60412 319 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 PPIAL4GP0DN37 164 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 PMELP40967 661 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 UBE2G1P62253 170 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 HABP2Q14520 560 aaPredicted RBP10.54□□□□□ -0.72
NR4A1-215ENST00000550557 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 KCNK15Q9H427 330 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 PIPOXQ9P0Z9 390 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 MDC1Q14676 2089 aaKnown RBP10.54□□□□□ -0.72
NR4A1-215ENST00000550557 CYB5R3P00387 301 aaPredicted RBP10.54□□□□□ -0.72
NR4A1-215ENST00000550557 FAM106CPP0CH98 169 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 CDKN1AP38936 164 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 TMEM128Q5BJH2 165 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 C1orf162Q8NEQ5 155 aaPredicted RBP10.54□□□□□ -0.72
NR4A1-215ENST00000550557 OR11H4Q8NGC9 324 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 OR5M8Q8NGP6 311 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 FLYWCH2Q96CP2 140 aaKnown RBP10.54□□□□□ -0.72
NR4A1-215ENST00000550557 TMPRSS13Q9BYE2 586 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 GPR27Q9NS67 375 aa10.54□□□□□ -0.72
NR4A1-215ENST00000550557 PPP1R1AQ13522 171 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 GLRX5Q86SX6 157 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 FLVCR1-AS1Q8TAF5 88 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 CACNA1AO00555 2505 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 CXCL2P19875 107 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 RPUSD3Q6P087 351 aaKnown RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 LHFPL5Q8TAF8 219 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 TMEM45BQ96B21 275 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 MRPS18CQ9Y3D5 142 aaKnown RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 TRAV39A0A0B4J263 110 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 CECR9P0C854 216 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 NANOS3P60323 173 aaKnown RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 TMEM182Q6ZP80 229 aaPredicted RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 OR5R1Q8NH85 324 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 SSC4DQ8WTU2 575 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 FAM222BQ8WU58 562 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 ACTR3CQ9C0K3 210 aaPredicted RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 ZNF331Q9NQX6 463 aaPredicted RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 MED9Q9NWA0 146 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 A0A0U1RQV5 110 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.53□□□□□ -0.72
NR4A1-215ENST00000550557 TRDCB7Z8K6 153 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 PHYHD1Q5SRE7 291 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 C12orf57Q99622 126 aa10.53□□□□□ -0.72
NR4A1-215ENST00000550557 VDAC1P21796 283 aa10.52□□□□□ -0.72
NR4A1-215ENST00000550557 REG1BP48304 166 aa10.52□□□□□ -0.72
NR4A1-215ENST00000550557 TPRX1Q8N7U7 411 aa10.52□□□□□ -0.72
NR4A1-215ENST00000550557 SIRT7Q9NRC8 400 aa10.52□□□□□ -0.72
NR4A1-215ENST00000550557 TIMM9Q9Y5J7 89 aa10.52□□□□□ -0.72
NR4A1-215ENST00000550557 ACACBO00763 2458 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 C9orf170A2RU37 121 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 GAPDHP04406 335 aaKnown RBP10.52□□□□□ -0.73
NR4A1-215ENST00000550557 NAT1P18440 290 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 C4orf17Q53FE4 359 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 VOPP1Q96AW1 172 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
NR4A1-215ENST00000550557 HARBI1Q96MB7 349 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
NR4A1-215ENST00000550557 PARP12Q9H0J9 701 aaKnown RBP10.52□□□□□ -0.73
NR4A1-215ENST00000550557 DEPPQ9NTK1 212 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 ZNF727A8MUV8 499 aa10.52□□□□□ -0.73
NR4A1-215ENST00000550557 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms