RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 KLHL22Q53GT1 634 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 C18orf65Q6ZTR6 163 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 MOB3BQ86TA1 216 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 LINC00311Q8N616 119 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 RNF152Q8N8N0 203 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 SUMF2Q8NBJ7 301 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 TMEM104Q8NE00 496 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR8H1Q8NGG4 311 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR51A2Q8NGJ7 313 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR10K1Q8NGX5 313 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR2T10Q8NGZ9 312 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR8U1Q8NH10 309 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 OR52N1Q8NH53 320 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 RFESDQ8TAC1 157 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 GPR148Q8TDV2 347 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 PYDC1Q8WXC3 89 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 EAF1Q96JC9 268 aaPredicted RBP5.99□□□□□ -1.45
NEK3-201ENST00000550331 JAM3Q9BX67 310 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 ABCG5Q9H222 651 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 TMPRSS5Q9H3S3 457 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 MRPS18AQ9NVS2 196 aaKnown RBP5.99□□□□□ -1.45
NEK3-201ENST00000550331 PAK1IP1Q9NWT1 392 aaPredicted RBP5.99□□□□□ -1.45
NEK3-201ENST00000550331 TAS2R4Q9NYW5 299 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 LINC00527Q9UJ94 153 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 ST3GAL6Q9Y274 331 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 GMPPBQ9Y5P6 360 aa5.99□□□□□ -1.45
NEK3-201ENST00000550331 TRAV39A0A0B4J263 110 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 A0A1W2PPE3 182 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 NCBP2LA6PVI3 153 aaKnown RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 H3BNX3 289 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 SDCBPO00560 298 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 RRP9O43818 475 aaKnown RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 ORC5O43913 435 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 ZNF780AO75290 641 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 CSTBP04080 98 aaKnown RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 ELANEP08246 267 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 NHLRC4P0CG21 123 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 IL3RAP26951 378 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 CD1BP29016 333 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 ZNF93P35789 620 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 GPR12P47775 334 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 CDX1P47902 265 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 REG1BP48304 166 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 SOX2P48431 317 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 ZNF137PP52743 207 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 RBM11P57052 281 aaKnown RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 PPP3R1P63098 170 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 FOXE3Q13461 319 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 GPR50Q13585 617 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 KIR2DS1Q14954 304 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 ZIK1Q3SY52 487 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 CXorf66Q5JRM2 361 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 ZFP1Q6P2D0 407 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 RPL22L1Q6P5R6 122 aaKnown RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 SATL1Q86VE3 508 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 CBR4Q8N4T8 237 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 Q8N9W7 124 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 OR52I1Q8NGK6 324 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 OR5M8Q8NGP6 311 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 RHOXF1Q8NHV9 184 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 RTN4IP1Q8WWV3 396 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 RGP1Q92546 391 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 ST6GALNAC6Q969X2 333 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 TMEM106AQ96A25 262 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 RAX2Q96IS3 184 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 CITED4Q96RK1 184 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 METTL9Q9H1A3 318 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 DCLRE1BQ9H816 532 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 TMEM138Q9NPI0 162 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 GFOD1Q9NXC2 390 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 AASSQ9UDR5 926 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 ZNF580Q9UK33 172 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 RPL36Q9Y3U8 105 aaKnown RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 SIRT4Q9Y6E7 314 aaPredicted RBP5.98□□□□□ -1.45
NEK3-201ENST00000550331 U3KQK5 164 aa5.98□□□□□ -1.45
NEK3-201ENST00000550331 IGHV3-72A0A0B4J1Y9 119 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 LINC01548A6NM66 108 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 GEMIN2O14893 280 aaKnown RBP5.97□□□□□ -1.45
NEK3-201ENST00000550331 CDRT1O95170 752 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 MOSP00540 346 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 IGHG4P01861 327 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 RPLP1P05386 114 aaKnown RBP5.97□□□□□ -1.45
NEK3-201ENST00000550331 LIMS3P0CW19 117 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 LIMS4P0CW20 117 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 OR5H8P0DN80 308 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 GTF2F2P13984 249 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 SERPINA2P20848 420 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 VDAC1P21796 283 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 GTF2A1P52655 376 aaPredicted RBP5.97□□□□□ -1.45
NEK3-201ENST00000550331 RAB25P57735 213 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 CFHR3Q02985 330 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 FHL3Q13643 280 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 C9orf66Q5T8R8 295 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 DDI2Q5TDH0 399 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 STX19Q8N4C7 294 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 FAM71E2Q8N5Q1 922 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 ZNF439Q8NDP4 499 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 TFAP2CQ92754 450 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 ARL11Q969Q4 196 aa5.97□□□□□ -1.45
NEK3-201ENST00000550331 DUX3Q96PT4 197 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms