RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 HDHD3Q9BSH5 251 aaPredicted RBP7.81□□□□□ -1.16
HDAC7-229ENST00000549883 SLC25A33Q9BSK2 321 aa7.81□□□□□ -1.16
HDAC7-229ENST00000549883 RAB18Q9NP72 206 aa7.81□□□□□ -1.16
HDAC7-229ENST00000549883 PCDHB16Q9NRJ7 776 aa7.81□□□□□ -1.16
HDAC7-229ENST00000549883 GFOD1Q9NXC2 390 aa7.81□□□□□ -1.16
HDAC7-229ENST00000549883 TRAPPC2LQ9UL33 140 aa7.81□□□□□ -1.16
HDAC7-229ENST00000549883 VWFP04275 2813 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 IGHV3-72A0A0B4J1Y9 119 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 A0A0B4J203 849 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 SMIM30A4D0T7 59 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A10PA6NDY2 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A18PA6NE21 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A16PA6NEW6 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A20PA6NIJ5 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A7PA6NKC0 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A9PA6NNJ1 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A12PA8MX19 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A5PA8MXJ8 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A23PA8MXZ1 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 ZNF736B4DX44 427 aaPredicted RBP7.8□□□□□ -1.16
HDAC7-229ENST00000549883 SLC17A2O00624 439 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 SOCS1O15524 211 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 DENRO43583 198 aaKnown RBP7.8□□□□□ -1.16
HDAC7-229ENST00000549883 ORC5O43913 435 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 PDCD6O75340 191 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 HBZP02008 142 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 SNRNP70P08621 437 aaKnown RBP7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A15PP0C7V4 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A13PP0C7W8 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A14PP0C7W9 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 FAM90A24PP0C7X0 464 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 GZMHP20718 246 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 CALRP27797 417 aaKnown RBP7.8□□□□□ -1.16
HDAC7-229ENST00000549883 BRS3P32247 399 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 HNF4GQ14541 408 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 HERPUD1Q15011 391 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 CT45A1Q5HYN5 189 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 C10orf99Q6UWK7 81 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 ZNF367Q7RTV3 350 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 NR2C2APQ86WQ0 139 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 SPARTQ8N0X7 666 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 OR10A7Q8NGE5 316 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 OR52L2PQ8NGH6 319 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 CT45A3Q8NHU0 189 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 CAPSLQ8WWF8 208 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 TMEM59Q9BXS4 323 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 PRSS22Q9GZN4 317 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 WNT10AQ9GZT5 417 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 LPAR5Q9H1C0 372 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 TAF9BQ9HBM6 251 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 SPACA1Q9HBV2 294 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 PITPNC1Q9UKF7 332 aa7.8□□□□□ -1.16
HDAC7-229ENST00000549883 PLXNB1O43157 2135 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 FOXI3A8MTJ6 420 aaPredicted RBP7.79□□□□□ -1.16
HDAC7-229ENST00000549883 ADARB2-AS1A8MUL3 147 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 M0QZ24 198 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 KCNAB3O43448 404 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 BPNT1O95861 308 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 BLVRBP30043 206 aaPredicted RBP7.79□□□□□ -1.16
HDAC7-229ENST00000549883 CEACAM3P40198 252 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 MADCAM1Q13477 382 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 ABCA11PQ4W5N1 156 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 HES5Q5TA89 166 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 OR51D1Q8NGF3 324 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 OR52M1Q8NGK5 317 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 OR6M1Q8NGM8 313 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 OR10X1Q8NGY0 326 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 FAM110DQ8TAY7 271 aaPredicted RBP7.79□□□□□ -1.16
HDAC7-229ENST00000549883 ST6GALNAC6Q969X2 333 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 RBM14Q96PK6 669 aaKnown RBP7.79□□□□□ -1.16
HDAC7-229ENST00000549883 TM2D1Q9BX74 207 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 PARP12Q9H0J9 701 aaKnown RBP7.79□□□□□ -1.16
HDAC7-229ENST00000549883 CST11Q9H112 138 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 LIN7BQ9HAP6 207 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 PLGRKTQ9HBL7 147 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 MBNL3Q9NUK0 354 aaKnown RBP7.79□□□□□ -1.16
HDAC7-229ENST00000549883 NDUFB11Q9NX14 153 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 GHRLQ9UBU3 117 aa7.79□□□□□ -1.16
HDAC7-229ENST00000549883 IGHV1-3A0A0C4DH29 117 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 OOSP1A8MZH6 123 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 HSD17B6O14756 317 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 LDLRAD4O15165 306 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 OR2F2O95006 317 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 IGKV1D-33P01593 117 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 IGKV1-33P01594 117 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 LPLP06858 475 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 UBBP0CG47 229 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 PPP1CCP36873 323 aaKnown RBP7.78□□□□□ -1.16
HDAC7-229ENST00000549883 MNDAP41218 407 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 TMEM50BP56557 158 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 GABARAPL2P60520 117 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 TRAM1Q15629 374 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 RAB11BQ15907 218 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 C2orf76Q3KRA6 126 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 TCTEX1D4Q5JR98 221 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 UBE2UQ5VVX9 321 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 CD200R1LQ6Q8B3 271 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 SLC16A12Q6ZSM3 486 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 Q6ZTK2 550 aa7.78□□□□□ -1.16
HDAC7-229ENST00000549883 MOB3BQ86TA1 216 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms