RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 TRAPPC6BQ86SZ2 158 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 RTN4RL2Q86UN3 420 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 Q8N2B8 174 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 ZNF565Q8N9K5 539 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 EDA2RQ9HAV5 297 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 ACOT13Q9NPJ3 140 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 KIF25Q9UIL4 384 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
PTCH1-217ENST00000548420 HSPB6O14558 160 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 HSMCR30P0CW71 290 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 PAX6P26367 422 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 DYNLT3P51808 116 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 RPS25P62851 125 aaKnown RBP11.12□□□□□ -0.63
PTCH1-217ENST00000548420 HSD17B12Q53GQ0 312 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 PRAMEF5Q5TYX0 476 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 AWAT2Q6E213 333 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 ZNF367Q7RTV3 350 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 GAPTQ8N292 157 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 ABHD12Q8N2K0 398 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 OR13A1Q8NGR1 328 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 TMEM203Q969S6 136 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 Q96M66 194 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 CLEC7AQ9BXN2 247 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 KRTAP4-5Q9BYR2 181 aa11.12□□□□□ -0.63
PTCH1-217ENST00000548420 RRP15Q9Y3B9 282 aaKnown RBP11.12□□□□□ -0.63
PTCH1-217ENST00000548420 MEIKINA0A087WXM9 373 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 SLC22A1O15245 554 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 GLAP06280 429 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 UBBP0CG47 229 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 MGMTP16455 207 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 QRFPP83859 136 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 FABP5Q01469 135 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 SSX1Q16384 188 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 GLT8D1Q68CQ7 371 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 SIGIRRQ6IA17 410 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 CD200R1LQ6Q8B3 271 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 Q6ZS46 218 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 OR10A7Q8NGE5 316 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 KIRREL1Q96J84 757 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 GFI1Q99684 422 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 BANF2Q9H503 90 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 Q9H521 79 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 SPACA1Q9HBV2 294 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 ING3Q9NXR8 418 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 LRRC42Q9Y546 428 aa11.11□□□□□ -0.63
PTCH1-217ENST00000548420 KMT2AQ03164 3969 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 LY6LH3BQJ8 138 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 IL1AP01583 271 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 MT-ND4P03905 459 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 GZMHP20718 246 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 DYNC1I2Q13409 638 aaKnown RBP11.1□□□□□ -0.63
PTCH1-217ENST00000548420 SSX2Q16385 188 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 UTF1Q5T230 341 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 UBE2UQ5VVX9 321 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 ZNF497Q6ZNH5 498 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 SLC16A12Q6ZSM3 486 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 MRPL41Q8IXM3 137 aaKnown RBP11.1□□□□□ -0.63
PTCH1-217ENST00000548420 SPARTQ8N0X7 666 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 ZNF596Q8TC21 504 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 SELENOIQ9C0D9 397 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 NPFFR1Q9GZQ6 430 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 ZNF286AQ9HBT8 521 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 CALYQ9NYX4 217 aa11.1□□□□□ -0.63
PTCH1-217ENST00000548420 TMEM30CPA0ZSE6 113 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 MCRIP1C9JLW8 97 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 C15orf65H3BRN8 121 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 H3BUI4 141 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 CRTAPO75718 401 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-217ENST00000548420 ARL6IP5O75915 188 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 FUT3P21217 361 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 HTR1DP28221 377 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 GLP1RP43220 463 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 ATAD3CQ5T2N8 411 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 ETV3LQ6ZN32 361 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 LIAT1Q6ZQX7 453 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 MRGPRDQ8TDS7 321 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 GPR61Q9BZJ8 451 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 CST11Q9H112 138 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 NDUFB11Q9NX14 153 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 IDI2-AS1Q9NZ38 188 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 DPM3Q9P2X0 92 aa11.09□□□□□ -0.63
PTCH1-217ENST00000548420 TRAV39A0A0B4J263 110 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 A6NDX4 124 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 TMEM14DPA8MWL7 114 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 SLC17A2O00624 439 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 ORC5O43913 435 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 CA11O75493 328 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 GALP22466 123 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 HTR2CP28335 458 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 RAB13P51153 203 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 RPS27AP62979 156 aaKnown RBP11.08□□□□□ -0.64
PTCH1-217ENST00000548420 RBM39Q14498 530 aaKnown RBP11.08□□□□□ -0.64
PTCH1-217ENST00000548420 HLA-DRB5Q30154 266 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 TMEM95Q3KNT9 176 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 RAB12Q6IQ22 244 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 SVOPQ8N4V2 548 aa11.08□□□□□ -0.64
PTCH1-217ENST00000548420 OR6M1Q8NGM8 313 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms