RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SGMS2Q8NHU3 365 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 STAG3L4Q8TBR4 150 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 LRRC20Q8TCA0 184 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 DOK4Q8TEW6 326 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 MUCL1Q96DR8 90 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 WDR34Q96EX3 536 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 SDHCQ99643 169 aaPredicted RBP2.5□□□□□ -2.01
PTCH1-216ENST00000548379 MS4A8Q9BY19 250 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 DERL2Q9GZP9 239 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 OR51B5Q9H339 312 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 RNF122Q9H9V4 155 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 CXorf21Q9HAI6 301 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 PROK2Q9HC23 129 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 NOSIPQ9Y314 301 aaKnown RBP2.5□□□□□ -2.01
PTCH1-216ENST00000548379 WIF1Q9Y5W5 379 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 ZFHX3Q15911 3703 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 AKAP9Q99996 3911 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 F8P00451 2351 aa2.5□□□□□ -2.01
PTCH1-216ENST00000548379 TNRC6AQ8NDV7 1962 aaKnown RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 SPTBN1Q01082 2364 aaKnown RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 A0A0A6YYD5 115 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 LYRM9A8MSI8 78 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 PLPP1O14494 284 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 NUPL2O15504 423 aaKnown RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 UGT2B11O75310 529 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 RP2O75695 350 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 SEMA3DO95025 777 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 FARS2O95363 451 aaKnown RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 KLK1P06870 262 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 SOD3P08294 240 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ACSM4P0C7M7 580 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 OR5H8P0DN80 308 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 CCL2P13500 99 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 GFAPP14136 432 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 CPMP14384 443 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 CTRB1P17538 263 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 USF1P22415 310 aaPredicted RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 LCN1P31025 176 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 CFHR2P36980 270 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 MAGEA3P43357 314 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 PPICP45877 212 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 MNAT1P51948 309 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ACTG1P63261 375 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 LOXL1Q08397 574 aaPredicted RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ESPL1Q14674 2120 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ZSCAN26Q16670 478 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 C18orf21Q32NC0 220 aaPredicted RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 NCMAPQ5T1S8 102 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 UBE2UQ5VVX9 321 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ADNP2Q6IQ32 1131 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 UGT2A3Q6UWM9 527 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 FBXW12Q6X9E4 464 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ZFP2Q6ZN57 461 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 DGAT2L6Q6ZPD8 337 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 CMC1Q7Z7K0 106 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 OAFQ86UD1 273 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 C3orf56Q8N813 242 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF615Q8N8J6 731 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 OR52R1Q8NGF1 315 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 FNDC9Q8TBE3 224 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 KCTD4Q8WVF5 259 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 HGDQ93099 445 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 TMBIM1Q969X1 311 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 MRGPRFQ96AM1 343 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 S100PBPQ96BU1 408 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 GALNT14Q96FL9 552 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ZNF681Q96N22 645 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 SERPINI1Q99574 410 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 KCNS3Q9BQ31 491 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 POTEKPQ9BYX7 375 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 TBL1XR1Q9BZK7 514 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 AICDAQ9GZX7 198 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 DSN1Q9H410 356 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 PIGUQ9H490 435 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 RETNQ9HD89 108 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 TREM1Q9NP99 234 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ZC4H2Q9NQZ6 224 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 TAS2R9Q9NYW1 312 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 CCDC59Q9P031 241 aaKnown RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 FLVCR2Q9UPI3 526 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 ASB4Q9Y574 426 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 KPTNQ9Y664 436 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 RP1L1Q8IWN7 2480 aaPredicted RBP2.49□□□□□ -2.01
PTCH1-216ENST00000548379 NBASA2RRP1 2371 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 SHANK1Q9Y566 2161 aa2.49□□□□□ -2.01
PTCH1-216ENST00000548379 UNC13CQ8NB66 2214 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 SETD2Q9BYW2 2564 aaPredicted RBP2.48□□□□□ -2.01
PTCH1-216ENST00000548379 DNHD1Q96M86 4753 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 CIB4A0PJX0 185 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 SMKR1H3BMG3 65 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 PGRMC1O00264 195 aaKnown RBP2.48□□□□□ -2.01
PTCH1-216ENST00000548379 HSBP1O75506 76 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 PRB2P02812 416 aaPredicted RBP2.48□□□□□ -2.01
PTCH1-216ENST00000548379 CLPSP04118 112 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 FABP3P05413 133 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 PRPS2P11908 318 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 RAB3BP20337 219 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 PMCHP20382 165 aa2.48□□□□□ -2.01
PTCH1-216ENST00000548379 CCNOP22674 350 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms