RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SLC19A3Q9BZV2 496 aa0.99□□□□□ -2.25
CCDC38-204ENST00000546816 OR51E2Q9H255 320 aa0.99□□□□□ -2.25
CCDC38-204ENST00000546816 FBXL15Q9H469 300 aa0.99□□□□□ -2.25
CCDC38-204ENST00000546816 LCTP09848 1927 aa0.99□□□□□ -2.25
CCDC38-204ENST00000546816 HELZ2Q9BYK8 2649 aaKnown RBP0.99□□□□□ -2.25
CCDC38-204ENST00000546816 COL18A1P39060 1754 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 ATG2BQ96BY7 2078 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 COL4A2P08572 1712 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 RAB3GAP2Q9H2M9 1393 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 ABCB11O95342 1321 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 GOLGA8IPA6NC78 632 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 SGCEO43556 437 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 DENRO43583 198 aaKnown RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 LDOC1O95751 146 aaPredicted RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 FADS2O95864 444 aaKnown RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 CRABP1P29762 137 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 BLVRBP30043 206 aaPredicted RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 HSPA13P48723 471 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 ETV1P50549 477 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 ZNF140P52738 457 aaPredicted RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 RAB2AP61019 212 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 STX3Q13277 289 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 FBXO48Q5FWF7 155 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 OR10J3Q5JRS4 329 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 N4BP2L1Q5TBK1 243 aaPredicted RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 COPS6Q7L5N1 327 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 LRRC6Q86X45 466 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 MUC15Q8N387 334 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 ZFAND2AQ8N6M9 145 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 OR4C16Q8NGL9 310 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 OR9I1Q8NGQ6 314 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 MFSD8Q8NHS3 518 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 SPPL2BQ8TCT7 592 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 IFT81Q8WYA0 676 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 GTF2H4Q92759 462 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 MRAP2Q96G30 205 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 HBEGFQ99075 208 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 AGPAT3Q9NRZ7 376 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 KCNIP2Q9NS61 270 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 ENPP5Q9UJA9 477 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 STK38LQ9Y2H1 464 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 OR51B4Q9Y5P0 310 aa0.98□□□□□ -2.25
CCDC38-204ENST00000546816 RP1L1Q8IWN7 2480 aaPredicted RBP0.98□□□□□ -2.25
CCDC38-204ENST00000546816 USP42Q9H9J4 1324 aaKnown RBP0.97□□□□□ -2.25
CCDC38-204ENST00000546816 MDC1Q14676 2089 aaKnown RBP0.97□□□□□ -2.25
CCDC38-204ENST00000546816 LOC102725191A0A1B0GVB3 256 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 ERICH4A6NGS2 130 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 ODF3BA8MYP8 253 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 ZNF879B4DU55 563 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 F5H5T6 163 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 KLRC4-KLRK1H3BQV0 150 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 BRI3O95415 125 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 SLC35E2BP0CK96 405 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 AKR1C4P17516 323 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 SKP2Q13309 424 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 PAFAH1B3Q15102 231 aaKnown RBP0.97□□□□□ -2.25
CCDC38-204ENST00000546816 TMIGD2Q96BF3 282 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 CCDC124Q96CT7 223 aaKnown RBP0.97□□□□□ -2.25
CCDC38-204ENST00000546816 DDIT4LQ96D03 193 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 SERPINB11Q96P15 392 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 POTEKPQ9BYX7 375 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 AICDAQ9GZX7 198 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 ADGRB3O60242 1522 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 KMT2BQ9UMN6 2715 aaPredicted RBP0.97□□□□□ -2.25
CCDC38-204ENST00000546816 PTPRKQ15262 1439 aa0.97□□□□□ -2.25
CCDC38-204ENST00000546816 KIAA0232Q92628 1395 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 SLIT2O94813 1529 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 IGSF23A1L1A6 192 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 A8MWP6 167 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 RAB36O95755 333 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 GP1BAP07359 652 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 TPM1P09493 284 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 CTSEP14091 401 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 NQO2P16083 231 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 RAB31Q13636 194 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 FLOT2Q14254 428 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 OR4D1Q15615 310 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 TMEM249Q2WGJ8 235 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 EBLN2Q6P2I7 272 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 VN1R4Q7Z5H5 301 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 C2orf73Q8N5S3 287 aaPredicted RBP0.96□□□□□ -2.26
CCDC38-204ENST00000546816 OR5C1Q8NGR4 320 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 OR11L1Q8NGX0 322 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 ANGPTL6Q8NI99 470 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 SUN5Q8TC36 379 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 GALMQ96C23 342 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 BCL2L14Q9BZR8 327 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 C11orf49Q9H6J7 331 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 METTL17Q9H7H0 456 aaPredicted RBP0.96□□□□□ -2.26
CCDC38-204ENST00000546816 FBXL3Q9UKT7 428 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 CRB1P82279 1406 aa0.96□□□□□ -2.26
CCDC38-204ENST00000546816 SYNRGQ9UMZ2 1314 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 COL4A1P02462 1669 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 FLG2Q5D862 2391 aaPredicted RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 GOLGA8QA0A0J9YX86 632 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 A0A1W2PQL4 384 aaPredicted RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 H3BSA7 217 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 GPR171O14626 319 aa0.95□□□□□ -2.26
CCDC38-204ENST00000546816 ZNF189O75820 626 aaPredicted RBP0.95□□□□□ -2.26
CCDC38-204ENST00000546816 LIMS3P0CW19 117 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms