RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 HBZP02008 142 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 CD3GP09693 182 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 CD34P28906 385 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 IER3P46695 156 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 RPL5P46777 297 aaKnown RBP13.65□□□□□ -0.22
LTBR-215ENST00000546296 SCAND1P57086 179 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 SSX2Q16385 188 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 KRTAP24-1Q3LI83 254 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 MINOS1Q5TGZ0 78 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 SLC16A12Q6ZSM3 486 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 OR9G1Q8NH87 305 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 OR1L1Q8NH94 360 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 FAM216AQ8WUB2 273 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 PHF21AQ96BD5 680 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 AJUBAQ96IF1 538 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 CMSS1Q9BQ75 279 aaKnown RBP13.65□□□□□ -0.22
LTBR-215ENST00000546296 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
LTBR-215ENST00000546296 ABRACLQ9P1F3 81 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 ZNRD1Q9P1U0 126 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 SCOCQ9UIL1 159 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 HILPDAQ9Y5L2 63 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 ETV7Q9Y603 341 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 MINOS1-NBL1R4GNA1 71 aa13.65□□□□□ -0.22
LTBR-215ENST00000546296 A0A087X0M5 115 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 IGHV3-43A0A0B4J1X8 118 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 A0A1B0GX30 115 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 CLDN34H7C241 214 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 RAB27BO00194 218 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 GABARAPO95166 117 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 NAPSAO96009 420 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 IGHV3-43DP0DP04 118 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 GNB3P16520 340 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 PAX6P26367 422 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 GNG10P50151 68 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 PLA1AQ53H76 456 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 UTF1Q5T230 341 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 ZNF554Q86TJ5 538 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 OR52M1Q8NGK5 317 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 OR5H6Q8NGV6 325 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 CREB3L1Q96BA8 519 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 SSX3Q99909 188 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 HDHD3Q9BSH5 251 aaPredicted RBP13.64□□□□□ -0.23
LTBR-215ENST00000546296 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 C12orf4Q9NQ89 552 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 RHBDL2Q9NX52 303 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 GNG12Q9UBI6 72 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 PSG11Q9UQ72 335 aa13.64□□□□□ -0.23
LTBR-215ENST00000546296 DSCAML1Q8TD84 2053 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 KIAA2026Q5HYC2 2103 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 LEUTXA8MZ59 168 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 J3QR06 171 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 F2RL2O00254 374 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 SCGNO76038 276 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
LTBR-215ENST00000546296 HIST1H1DP16402 221 aaKnown RBP13.63□□□□□ -0.23
LTBR-215ENST00000546296 TALDO1P37837 337 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 CEACAM3P40198 252 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 ARFRP1Q13795 201 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 ARL6IP1Q15041 203 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 CTF1Q16619 201 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 LRRC75BQ2VPJ9 315 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 TMEM30BQ3MIR4 351 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 CDNFQ49AH0 187 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 OLFML2AQ68BL7 652 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 C16orf87Q6PH81 154 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 MOB1BQ7L9L4 216 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 CLVS1Q8IUQ0 354 aaPredicted RBP13.63□□□□□ -0.23
LTBR-215ENST00000546296 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.63□□□□□ -0.23
LTBR-215ENST00000546296 OR4P4Q8NGL7 312 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 OR10X1Q8NGY0 326 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 SLC25A46Q96AG3 418 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 MDFIQ99750 246 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 C19orf24Q9BVV8 132 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 MMP28Q9H239 520 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 OR2S2Q9NQN1 319 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 ABCB10Q9NRK6 738 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 GFOD1Q9NXC2 390 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 SPATA2Q9UM82 520 aa13.63□□□□□ -0.23
LTBR-215ENST00000546296 AMMECR1Q9Y4X0 333 aaPredicted RBP13.63□□□□□ -0.23
LTBR-215ENST00000546296 A0A1W2PPE3 182 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 BUB1B-PAK6H3BSN5 160 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 H3BUX3 64 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 IGLV1-47P01700 117 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 ACTG1P63261 375 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 LDLRAD2Q5SZI1 272 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 C5orf24Q7Z6I8 188 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 DYNAPQ8N1N2 210 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 OR10V1Q8NGI7 309 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 OR5R1Q8NH85 324 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 IL1F10Q8WWZ1 152 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 GALMQ96C23 342 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 CHIAQ9BZP6 476 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 MGAT4AQ9UM21 535 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 KCNK7Q9Y2U2 307 aa13.62□□□□□ -0.23
LTBR-215ENST00000546296 TRBV6-6A0A0A6YYG2 114 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 POM121CA8CG34 1229 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms