RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 MMP27Q9H306 513 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 KCNIP1Q9NZI2 227 aa9.49□□□□□ -0.89
HDAC4-216ENST00000544989 KMT2CQ8NEZ4 4911 aaKnown RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 C15orf65H3BRN8 121 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 SLC17A2O00624 439 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 DENRO43583 198 aaKnown RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 OR2F2O95006 317 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 VSIG8P0DPA2 414 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 GALP22466 123 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 GP2P55259 537 aaKnown RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 RPS25P62851 125 aaKnown RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 RPS27AP62979 156 aaKnown RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 INSL4Q14641 139 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 FAM27D1Q5T7N8 215 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 STEAP3Q658P3 488 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 OR2W3Q7Z3T1 314 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 KLHDC1Q8N7A1 406 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 FCGR1BQ92637 280 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 FAM46BQ96A09 425 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 RBM14Q96PK6 669 aaKnown RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 OCSTAMPQ9BR26 566 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 TM2D1Q9BX74 207 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 RIMS4Q9H426 269 aaPredicted RBP9.48□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF702PQ9H963 129 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 PLGRKTQ9HBL7 147 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 GFOD1Q9NXC2 390 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF581Q9P0T4 197 aa9.48□□□□□ -0.89
HDAC4-216ENST00000544989 NBEAL2Q6ZNJ1 2754 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 CCRL2O00421 344 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 PDCD5O14737 125 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 TXNL1O43396 289 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 GAPDHP04406 335 aaKnown RBP9.47□□□□□ -0.89
HDAC4-216ENST00000544989 ARSBP15848 533 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 CALRP27797 417 aaKnown RBP9.47□□□□□ -0.89
HDAC4-216ENST00000544989 VDAC2P45880 294 aaPredicted RBP9.47□□□□□ -0.89
HDAC4-216ENST00000544989 MAP2K4P45985 399 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 SRSF4Q08170 494 aaKnown RBP9.47□□□□□ -0.89
HDAC4-216ENST00000544989 ZNF816Q0VGE8 651 aaPredicted RBP9.47□□□□□ -0.89
HDAC4-216ENST00000544989 RAB11BQ15907 218 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 LTC4SQ16873 150 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 TMEM91Q6ZNR0 172 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 MOB1BQ7L9L4 216 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 CCDC107Q8WV48 283 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 SLC25A33Q9BSK2 321 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 MBNL3Q9NUK0 354 aaKnown RBP9.47□□□□□ -0.89
HDAC4-216ENST00000544989 GNG12Q9UBI6 72 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 MGAT4AQ9UM21 535 aa9.47□□□□□ -0.89
HDAC4-216ENST00000544989 TRAV1-2A0A0B4J238 106 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 TRAV39A0A0B4J263 110 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 FAM90A9PA6NNJ1 464 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 TMEM14DPA8MWL7 114 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 C12orf77C9JDV5 145 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 HSD17B6O14756 317 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 RGS11O94810 467 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 CSF1P09603 554 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 VSIG10L2P0DP72 767 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 MYL9P24844 172 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 CHATP28329 748 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 GNG10P50151 68 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 LOXL3P58215 753 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 KRTAP10-3P60369 221 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 NKAPLQ5M9Q1 402 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 SIGIRRQ6IA17 410 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 OR4K15Q8NH41 348 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 CFHR4Q92496 578 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 PLEKHJ1Q9NW61 149 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 NDUFB11Q9NX14 153 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 ABRACLQ9P1F3 81 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 SIGLEC9Q9Y336 463 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 MOB4Q9Y3A3 225 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 V9GY05 133 aa9.46□□□□□ -0.9
HDAC4-216ENST00000544989 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 UBE2QL1A1L167 161 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 FBXO24O75426 580 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 HBZP02008 142 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 QRFPP83859 136 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 HTD2P86397 168 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 FABP5Q01469 135 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 EMX1Q04741 257 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-216ENST00000544989 HABP2Q14520 560 aaPredicted RBP9.45□□□□□ -0.9
HDAC4-216ENST00000544989 LY6G6FQ5SQ64 297 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 UBE2UQ5VVX9 321 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 CD200R1LQ6Q8B3 271 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 SLC25A48Q6ZT89 311 aaKnown RBP9.45□□□□□ -0.9
HDAC4-216ENST00000544989 LEAP2Q969E1 77 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 GALMQ96C23 342 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 TAF9BQ9HBM6 251 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 OR2S2Q9NQN1 319 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 SERTAD4Q9NUC0 356 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 JPT1Q9UK76 154 aa9.45□□□□□ -0.9
HDAC4-216ENST00000544989 TRDV1A0A1B0GX56 115 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 A0A1W2PPI3 338 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 FGF16O43320 207 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 IGHV3-7P01780 117 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 SNRNP70P08621 437 aaKnown RBP9.44□□□□□ -0.9
HDAC4-216ENST00000544989 TMEM11P17152 192 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 JUNBP17275 347 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-216ENST00000544989 BLVRBP30043 206 aaPredicted RBP9.44□□□□□ -0.9
HDAC4-216ENST00000544989 ZNF137PP52743 207 aa9.44□□□□□ -0.9
HDAC4-216ENST00000544989 BLCAPP62952 87 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms