RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CHCHD3Q9NX63 227 aaKnown RBP10□□□□□ -0.81
USP28-212ENST00000544750 PSG11Q9UQ72 335 aa10□□□□□ -0.81
USP28-212ENST00000544750 TRBV5-7A0A0A0MS05 114 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 PNMA8CA0A1B0GUJ8 204 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 MAGEA13PA6NCF6 341 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 PTGES3LE9PB15 166 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 SLC33A1O00400 549 aaPredicted RBP9.99□□□□□ -0.81
USP28-212ENST00000544750 GABRPO00591 440 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 MYL12BO14950 172 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 IGHG4P01861 327 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 CD1AP06126 327 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 HCKP08631 526 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 FRMD6-AS1P0C7T7 363 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 OCM2P0CE71 109 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 IGFBP3P17936 291 aaPredicted RBP9.99□□□□□ -0.81
USP28-212ENST00000544750 RAB3AP20336 220 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 NFYBP25208 207 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 TAS2R43P59537 309 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 MADCAM1Q13477 382 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 KIAA0141Q14154 515 aaPredicted RBP9.99□□□□□ -0.81
USP28-212ENST00000544750 KRBOX4Q5JUW0 171 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 ZFAND6Q6FIF0 208 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 OVCH2Q7RTZ1 564 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 SAXO1Q8IYX7 474 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 Q8N9W7 124 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 OR11H1Q8NG94 326 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 LEAP2Q969E1 77 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 EAF1Q96JC9 268 aaPredicted RBP9.99□□□□□ -0.81
USP28-212ENST00000544750 GON7Q9BXV9 100 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 DUSP21Q9H596 190 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 PLSCR3Q9NRY6 295 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 OR6C3Q9NZP0 311 aa9.99□□□□□ -0.81
USP28-212ENST00000544750 ALMS1Q8TCU4 4167 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 TRAV8-7A0A075B6U6 113 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 NPIPB11E5RHQ5 1161 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 CYB5AP00167 134 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 IGHV3-7P01780 117 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 CD2P06729 351 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 FSTP19883 344 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 CRHBPP24387 322 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 PSMB8P28062 276 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 HSPA13P48723 471 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 ZNF816Q0VGE8 651 aaPredicted RBP9.98□□□□□ -0.81
USP28-212ENST00000544750 ATXN7L3Q14CW9 347 aaPredicted RBP9.98□□□□□ -0.81
USP28-212ENST00000544750 Q499Y3 187 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 YIF1BQ5BJH7 314 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 IZUMO1Q8IYV9 350 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 OR51T1Q8NGJ9 327 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 OR13A1Q8NGR1 328 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 OR14A2Q96R54 314 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 TM2D3Q9BRN9 247 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 MND1Q9BWT6 205 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 NCOR1P1Q9H4R4 102 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 CALYQ9NYX4 217 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 IDI2-AS1Q9NZ38 188 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 TNCP24821 2201 aa9.98□□□□□ -0.81
USP28-212ENST00000544750 IGHV1-3A0A0C4DH29 117 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 I3L521 148 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 GPX5O75715 221 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 LY86O95711 162 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 IL1AP01583 271 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 OCMP0CE72 109 aaPredicted RBP9.97□□□□□ -0.81
USP28-212ENST00000544750 ZNF44P15621 663 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 CELP19835 753 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 VHLP40337 213 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 ASCL4Q6XD76 172 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 ADAMTSL5Q6ZMM2 481 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 PXT1Q8NFP0 134 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 CNBD2Q96M20 576 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 DERL3Q96Q80 235 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 HSPB9Q9BQS6 159 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 ZMAT4Q9H898 229 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 RHOFQ9HBH0 211 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 NEK6Q9HC98 313 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 ING3Q9NXR8 418 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 SCN3BQ9NY72 215 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 ERGIC3Q9Y282 383 aa9.97□□□□□ -0.81
USP28-212ENST00000544750 HSD17B6O14756 317 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 TMEM225BP0DP42 221 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 RUNX1Q01196 453 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 PAX5Q02548 391 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 INSL4Q14641 139 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 DDI2Q5TDH0 399 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 ELP2Q6IA86 826 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 SLC16A12Q6ZSM3 486 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 ZNF429Q86V71 674 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 LYPD6Q86Y78 171 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 FAM71E2Q8N5Q1 922 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 TMEM104Q8NE00 496 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 TMEM138Q9NPI0 162 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 KIF25Q9UIL4 384 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 RAB26Q9ULW5 256 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 TPRKBQ9Y3C4 175 aa9.96□□□□□ -0.82
USP28-212ENST00000544750 IGHV3-72A0A0B4J1Y9 119 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 A0A1W2PPE3 182 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 A0A1W2PPK0 400 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 TRIM64CA6NLI5 447 aa9.95□□□□□ -0.82
USP28-212ENST00000544750 NCBP2LA6PVI3 153 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms