RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 MOB3AQ96BX8 217 aa12.77□□□□□ -0.37
RDX-218ENST00000544551 GNPNAT1Q96EK6 184 aaPredicted RBP12.77□□□□□ -0.37
RDX-218ENST00000544551 PFDN5Q99471 154 aa12.77□□□□□ -0.37
RDX-218ENST00000544551 PSG11Q9UQ72 335 aa12.77□□□□□ -0.37
RDX-218ENST00000544551 STRAPQ9Y3F4 350 aaKnown RBP12.77□□□□□ -0.37
RDX-218ENST00000544551 LY6G6EA0A0G2JKS1 128 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 LNP1A1A4G5 178 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 ZNF716A6NP11 495 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 DFFBO76075 338 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 IFNA1P01562 189 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 HMGN3Q15651 99 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 KCNMB1Q16558 191 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 H2BFWTQ7Z2G1 175 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 LHFPL1Q86WI0 220 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 PARP11Q9NR21 331 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 U3KQA8 63 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 LILRA1O75019 489 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 HLA-GP17693 338 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 PPP1CBP62140 327 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 SLC25A40Q8TBP6 338 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 C10orf35Q96D05 121 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 NKX2-8O15522 239 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 MMP9P14780 707 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 MSMO1Q15800 293 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 OR2Z1Q8NG97 314 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 TM2D1Q9BX74 207 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 TMEM222Q9H0R3 208 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 ENY2Q9NPA8 101 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 CACFD1Q9UGQ2 172 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 POLDIP2Q9Y2S7 368 aa12.76□□□□□ -0.37
RDX-218ENST00000544551 SPAARA0A1B0GVQ0 90 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 ZNF528Q3MIS6 628 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 ZNF343Q6P1L6 599 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 RBMS3Q6XE24 437 aaKnown RBP12.75□□□□□ -0.37
RDX-218ENST00000544551 ZNF561Q8N587 486 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 POMT1Q9Y6A1 747 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 INTS1Q8N201 2190 aaKnown RBP12.75□□□□□ -0.37
RDX-218ENST00000544551 TECTAO75443 2155 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 IGSF23A1L1A6 192 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 LRRC3CA6NJW4 275 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 YIF1AO95070 293 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 HBE1P02100 147 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 CELA3BP08861 270 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 G6PCP35575 357 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 CCL20P78556 96 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 Q3ZCU0 254 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 PDLIM3Q53GG5 364 aaPredicted RBP12.75□□□□□ -0.37
RDX-218ENST00000544551 DEFB124Q8NES8 71 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 OR4F5Q8NH21 305 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 OR4F4Q96R69 305 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 ZNF391Q9UJN7 358 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 AUP1Q9Y679 476 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 NOTCH3Q9UM47 2321 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 TRAV20A0A0B4J274 112 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 CCL1P22362 96 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 CATR1Q13166 79 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 CEACAM21Q3KPI0 293 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 LFNGQ8NES3 379 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 GALMQ96C23 342 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 ZNF665Q9H7R5 613 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 FOXD3Q9UJU5 478 aaPredicted RBP12.75□□□□□ -0.37
RDX-218ENST00000544551 ZGRF1Q86YA3 2104 aa12.75□□□□□ -0.37
RDX-218ENST00000544551 IGLV3-32A0A0A0MS00 114 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 A0A1W2PPE3 182 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 WNT9BO14905 357 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 SPRY3O43610 288 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 SELENOVP59797 346 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 GGNQ86UU5 652 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 PROK2Q9HC23 129 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 OR5H1A6NKK0 313 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 H3BQ15 152 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 PMELP40967 661 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 ZNF83P51522 516 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 FGF12P61328 243 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 ABHD14BQ96IU4 210 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 OR2W1Q9Y3N9 320 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.74□□□□□ -0.377e-7■□□□□ 10.5
RDX-218ENST00000544551 TLN1Q9Y490 2541 aaKnown RBP12.74□□□□□ -0.37
RDX-218ENST00000544551 ARFGEF3Q5TH69 2177 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 SYNGR2O43760 224 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 SP1P08047 785 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 SEC11BP0C7V7 166 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 F2RP25116 425 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 PRAMEF5Q5TYX0 476 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 CABLES2Q9BTV7 478 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 TMEM100Q9NV29 134 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 DLL3Q9NYJ7 618 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 FBLN5Q9UBX5 448 aa12.74□□□□□ -0.37
RDX-218ENST00000544551 PGLYRP1O75594 196 aaPredicted RBP12.73□□□□□ -0.37
RDX-218ENST00000544551 MT-ND4LP03901 98 aa12.73□□□□□ -0.37
RDX-218ENST00000544551 SNIP1Q8TAD8 396 aaKnown RBP12.73□□□□□ -0.37
RDX-218ENST00000544551 SEMA5BQ9P283 1151 aa12.73□□□□□ -0.37
RDX-218ENST00000544551 CLN8Q9UBY8 286 aa12.73□□□□□ -0.37
RDX-218ENST00000544551 HSF4Q9ULV5 492 aa12.73□□□□□ -0.37
RDX-218ENST00000544551 FRYQ5TBA9 3013 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms