RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 PAX6P26367 422 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 FAM189A2Q15884 450 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 HLA-DRB5Q30154 266 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 TMEM30BQ3MIR4 351 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 C6orf183Q5T699 404 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 C16orf87Q6PH81 154 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 OR9G1Q8NH87 305 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 PECRQ9BY49 303 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 AK3Q9UIJ7 227 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 PSG11Q9UQ72 335 aa15.46■□□□□ 0.07
DDX55-211ENST00000544429 TMEM89A2RUT3 159 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 J3QR06 171 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 NFYBP25208 207 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 HTR1DP28221 377 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 RPS19P39019 145 aaKnown RBP15.45■□□□□ 0.06
DDX55-211ENST00000544429 DYNLT3P51808 116 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 RPL15P61313 204 aaKnown RBP15.45■□□□□ 0.06
DDX55-211ENST00000544429 DYNC1I2Q13409 638 aaKnown RBP15.45■□□□□ 0.06
DDX55-211ENST00000544429 HMGN3Q15651 99 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 LRRC75BQ2VPJ9 315 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 Q3ZCU0 254 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 Q6ZTK2 550 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 ANKRD13BQ86YJ7 626 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 C8orf31Q8N9H6 132 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 OR10R2Q8NGX6 335 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 OR5R1Q8NH85 324 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 RIMS4Q9H426 269 aaPredicted RBP15.45■□□□□ 0.06
DDX55-211ENST00000544429 TAF9BQ9HBM6 251 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 GFOD1Q9NXC2 390 aa15.45■□□□□ 0.06
DDX55-211ENST00000544429 STAB1Q9NY15 2570 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 BUB1B-PAK6H3BSN5 160 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 MFNGO00587 321 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 GABARAPO95166 117 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 HBZP02008 142 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 SNRPBP14678 240 aaKnown RBP15.44■□□□□ 0.06
DDX55-211ENST00000544429 COMPP49747 757 aaPredicted RBP15.44■□□□□ 0.06
DDX55-211ENST00000544429 SSX2Q16385 188 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 CTF1Q16619 201 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 OLFML2AQ68BL7 652 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 OR1L1Q8NH94 360 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 SPATA3Q8NHX4 192 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 LGALS14Q8TCE9 139 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 SSX3Q99909 188 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 HDHD3Q9BSH5 251 aaPredicted RBP15.44■□□□□ 0.06
DDX55-211ENST00000544429 MMP28Q9H239 520 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 RAB9BQ9NP90 201 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.44■□□□□ 0.06
DDX55-211ENST00000544429 DPM3Q9P2X0 92 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 VPREB3Q9UKI3 123 aa15.44■□□□□ 0.06
DDX55-211ENST00000544429 METTL21EPA6NDL7 271 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 SDCBPO00560 298 aaPredicted RBP15.43■□□□□ 0.06
DDX55-211ENST00000544429 SPINT2O43291 252 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 HKR1P10072 659 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 PRRX1P54821 245 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 NCS1P62166 190 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 LSM3P62310 102 aaKnown RBP15.43■□□□□ 0.06
DDX55-211ENST00000544429 HTD2P86397 168 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 FAM53AQ6NSI3 398 aaPredicted RBP15.43■□□□□ 0.06
DDX55-211ENST00000544429 CROCCP3Q8IVE0 287 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 LINC00311Q8N616 119 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 ZNF439Q8NDP4 499 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 UBALD1Q8TB05 177 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 LEAP2Q969E1 77 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 CREB3L1Q96BA8 519 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 SLC25A38Q96DW6 304 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 RAB3CQ96E17 227 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 C12orf4Q9NQ89 552 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 ETV7Q9Y603 341 aa15.43■□□□□ 0.06
DDX55-211ENST00000544429 TENM1Q9UKZ4 2725 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 FAM181BA6NEQ2 426 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 H3BUX3 64 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 TOR1AO14656 332 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 GPR137BO60478 399 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 HIST1H1DP16402 221 aaKnown RBP15.42■□□□□ 0.06
DDX55-211ENST00000544429 LTC4SQ16873 150 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 MOB1BQ7L9L4 216 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 C5orf24Q7Z6I8 188 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 OR5H6Q8NGV6 325 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 SLC25A46Q96AG3 418 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 NAA50Q9GZZ1 169 aaKnown RBP15.42■□□□□ 0.06
DDX55-211ENST00000544429 DNHD1Q96M86 4753 aa15.42■□□□□ 0.06
DDX55-211ENST00000544429 LEUTXA8MZ59 168 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 IGHV3-7P01780 117 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 VBP1P61758 197 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 LY6G6FQ5SQ64 297 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 IDNKQ5T6J7 187 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 TPTE2P1Q5T6R2 138 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 NDNFQ8TB73 568 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 ATG5Q9H1Y0 275 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 Q9N2K0 584 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 TNFRSF19Q9NS68 423 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 RHBDL2Q9NX52 303 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 KCNIP1Q9NZI2 227 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 SPATA2Q9UM82 520 aa15.41■□□□□ 0.06
DDX55-211ENST00000544429 SERPINE3A8MV23 424 aa15.4■□□□□ 0.06
DDX55-211ENST00000544429 OOSP1A8MZH6 123 aa15.4■□□□□ 0.06
DDX55-211ENST00000544429 GNB3P16520 340 aa15.4■□□□□ 0.06
DDX55-211ENST00000544429 CEACAM3P40198 252 aa15.4■□□□□ 0.06
DDX55-211ENST00000544429 ZNF137PP52743 207 aa15.4■□□□□ 0.06
DDX55-211ENST00000544429 RELBQ01201 579 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms