RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 TRIP6Q15654 476 aaKnown RBP13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 KRTAP27-1Q3LI81 207 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 COLCA1Q6ZS62 124 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 DPPA2Q7Z7J5 298 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 WDR86Q86TI4 376 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 RNASE11Q8TAA1 199 aaKnown RBP13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 FAM213BQ8TBF2 198 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 COL27A1Q8IZC6 1860 aaPredicted RBP13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 ABCA4P78363 2273 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 TRAV24A0A0B4J272 114 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 RPL36A-HNRNPH2H7BZ11 118 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 HSPA12AO43301 675 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM50AO95807 157 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 FBP1P09467 338 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 ARL6IP1Q15041 203 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 CEACAM21Q3KPI0 293 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 Q6ZSR3 168 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 OR1K1Q8NGR3 316 aa13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 EIF5A2Q9GZV4 153 aaKnown RBP13.44□□□□□ -0.26
SNRNP70-203ENST00000544278 RRP8O43159 456 aaKnown RBP13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 WDR1O75083 606 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 FABP6P51161 128 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 SURF2Q15527 256 aaPredicted RBP13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 RNF212Q495C1 297 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 VWA1Q6PCB0 445 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 DMBX1Q8NFW5 382 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 NRIP2Q9BQI9 281 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 MSL2Q9HCI7 577 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 RNASEK-C17orf49H0YIS7 233 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 OR13C7P0DN81 318 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 ASCL4Q6XD76 172 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 STX12Q86Y82 276 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 LGI3Q8N145 548 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 Q9N2K0 584 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM9BQ9NQ34 198 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 SMCO4Q9NRQ5 59 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 SPTAN1Q13813 2472 aaKnown RBP13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 IGKV3D-15A0A087WSY6 115 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 ZNF729A6NN14 1252 aaPredicted RBP13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 KLRC4-KLRK1H3BQV0 150 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 UBE2CO00762 179 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 IAPPP10997 89 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 CD46P15529 392 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 EIF2S3P41091 472 aaKnown RBP13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 CAMLGP49069 296 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 SSTP61278 116 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 FGF12P61328 243 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 FOXF2Q12947 444 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 PLPPR1Q8TBJ4 325 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 WDYHV1Q96HA8 205 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 RGCCQ9H4X1 137 aa13.43□□□□□ -0.26
SNRNP70-203ENST00000544278 MED13LQ71F56 2210 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 ST8SIA3O43173 380 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 SNAPC5O75971 98 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 RFESDQ8TAC1 157 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 SPSB4Q96A44 273 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 SYT3Q9BQG1 590 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 ZPBPQ9BS86 351 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 SLC34A2O95436 690 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 PSG2P11465 335 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 MPV17P39210 176 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 NDUFA6P56556 154 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 CCL20P78556 96 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM267Q0VDI3 215 aaPredicted RBP13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 ZNF154Q13106 437 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 SSX2Q16385 188 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 UQCC3Q6UW78 93 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 FAM58AQ8N1B3 248 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 GPR87Q9BY21 358 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM100Q9NV29 134 aa13.42□□□□□ -0.26
SNRNP70-203ENST00000544278 CST4P01036 141 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 PYY3Q5JQD4 70 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 ZNF808Q8N4W9 903 aaPredicted RBP13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 MDS2Q8NDY4 140 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 SLC25A40Q8TBP6 338 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM171Q8WVE6 324 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 TMEM45BQ96B21 275 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 C18orf12Q96KH6 178 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 SSX3Q99909 188 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 RARRES2Q99969 163 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 TOLLIPQ9H0E2 274 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 AKAP6Q13023 2319 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 IGHV3-43A0A0B4J1X8 118 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 TSPAN15O95858 294 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 IGHV3-43DP0DP04 118 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 G0S2P27469 103 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 NKX2-1P43699 371 aaPredicted RBP13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 SPINK9Q5DT21 86 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 PRAMEF6Q5VXH4 476 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 OR5P3Q8WZ94 311 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 MMP26Q9NRE1 261 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 DLL3Q9NYJ7 618 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 KLF13Q9Y2Y9 288 aaPredicted RBP13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 ZZEF1O43149 2961 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 DEFB108AA8MXU0 73 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 DEGS1O15121 323 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 FBXW9Q5XUX1 488 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 CCDC54Q8NEL0 328 aa13.41□□□□□ -0.26
SNRNP70-203ENST00000544278 OR1J1Q8NGS3 322 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms