RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PRR18Q8N4B5 295 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 OR10A7Q8NGE5 316 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 ZDHHC16Q969W1 377 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 TAF9BQ9HBM6 251 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 C12orf4Q9NQ89 552 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 ZNRD1Q9P1U0 126 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 ELF5Q9UKW6 265 aaPredicted RBP12.25□□□□□ -0.45
CD9-210ENST00000543916 FAM96BQ9Y3D0 163 aa12.25□□□□□ -0.45
CD9-210ENST00000543916 TRBV6-6A0A0A6YYG2 114 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 IGHV3-43A0A0B4J1X8 118 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 F2RL2O00254 374 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 SPINT2O43291 252 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 HOXA3O43365 443 aaPredicted RBP12.24□□□□□ -0.45
CD9-210ENST00000543916 IGLV1-47P01700 117 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 FBP1P09467 338 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 IGHV3-43DP0DP04 118 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 FBN1P35555 2871 aaKnown RBP12.24□□□□□ -0.45
CD9-210ENST00000543916 TMBIM6P55061 237 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 LGALS4P56470 323 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 LOXL3P58215 753 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 HMGN3Q15651 99 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 LDLRAD3Q86YD5 345 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 DYNAPQ8N1N2 210 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 OR4P4Q8NGL7 312 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 SETD6Q8TBK2 473 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 RAB2BQ8WUD1 216 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 DUX5Q96PT3 197 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 CMSS1Q9BQ75 279 aaKnown RBP12.24□□□□□ -0.45
CD9-210ENST00000543916 KCNIP1Q9NZI2 227 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 TBL2Q9Y4P3 447 aaKnown RBP12.24□□□□□ -0.45
CD9-210ENST00000543916 JMJD1CQ15652 2540 aa12.24□□□□□ -0.45
CD9-210ENST00000543916 SDCBPO00560 298 aaPredicted RBP12.23□□□□□ -0.45
CD9-210ENST00000543916 GNG10P50151 68 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 CDNFQ49AH0 187 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 MOB1BQ7L9L4 216 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 ZNF554Q86TJ5 538 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 OR52M1Q8NGK5 317 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
CD9-210ENST00000543916 JMJD8Q96S16 334 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 RIMS4Q9H426 269 aaPredicted RBP12.23□□□□□ -0.45
CD9-210ENST00000543916 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.23□□□□□ -0.45
CD9-210ENST00000543916 GFOD1Q9NXC2 390 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 PSG11Q9UQ72 335 aa12.23□□□□□ -0.45
CD9-210ENST00000543916 SERPINE3A8MV23 424 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 SCGNO76038 276 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 IGHV4-59P01825 116 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 FCGR3AP08637 254 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 CD3GP09693 182 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 RORCP51449 518 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 UBA52P62987 128 aaKnown RBP12.22□□□□□ -0.45
CD9-210ENST00000543916 GNMTQ14749 295 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 SLC9A3R2Q15599 337 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 HLA-DRB5Q30154 266 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 ZNF260Q3ZCT1 412 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 UBE2NLQ5JXB2 153 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 SAMD12Q8N8I0 201 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 OR9G1Q8NH87 305 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 ZNF596Q8TC21 504 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 ISOC1Q96CN7 298 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 BCL7BQ9BQE9 202 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 ABCG5Q9H222 651 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 Q9N2K0 584 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 RAB9BQ9NP90 201 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 TNFRSF19Q9NS68 423 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 CEPT1Q9Y6K0 416 aa12.22□□□□□ -0.45
CD9-210ENST00000543916 A0A1W2PPE3 182 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 TMEM235A6NFC5 223 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 H3BMQ9 156 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 J3QR06 171 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 TOR1AO14656 332 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 HTR1DP28221 377 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 IER3P46695 156 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 PRRX1P54821 245 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 HLA-DRB3P79483 266 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 KRTAP24-1Q3LI83 254 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 TMEM30BQ3MIR4 351 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 MINOS1Q5TGZ0 78 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 IZUMO1Q8IYV9 350 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 OR52L2PQ8NGH6 319 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 MEGF9Q9H1U4 602 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 MMP28Q9H239 520 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 COMMD3Q9UBI1 195 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 MINOS1-NBL1R4GNA1 71 aa12.21□□□□□ -0.45
CD9-210ENST00000543916 TRAV18A0A075B6X5 111 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 A0A0A6YYH2 397 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 A6NJ64 397 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 POM121CA8CG34 1229 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 BUB1B-PAK6H3BSN5 160 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
CD9-210ENST00000543916 EIF4EP06730 217 aaKnown RBP12.2□□□□□ -0.46
CD9-210ENST00000543916 GSTP1P09211 210 aaKnown RBP12.2□□□□□ -0.46
CD9-210ENST00000543916 MRPS15P82914 257 aaKnown RBP12.2□□□□□ -0.46
CD9-210ENST00000543916 HTD2P86397 168 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 SSX2Q16385 188 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 KRTAP21-3Q3LHN1 58 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms