RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 WIPI1Q5MNZ9 446 aaPredicted RBP11.04□□□□□ -0.64
DDX11-223ENST00000542838 MKXQ8IYA7 352 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 ABHD3Q8WU67 409 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 C9J4A7 227 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 RFPL3SP0C7P2 107 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 CCL2P13500 99 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 C9orf135Q5VTT2 229 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 PCSK4Q6UW60 755 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 ZDHHC23Q8IYP9 409 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 SAXO1Q8IYX7 474 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 C17orf78Q8N4C9 275 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 SDF2L1Q9HCN8 221 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 TMEM242Q9NWH2 141 aa11.04□□□□□ -0.64
DDX11-223ENST00000542838 TGOLN2O43493 480 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 PGA5P0DJD9 388 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 RNPS1Q15287 305 aaKnown RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 ZNF726P1Q15940 193 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 C20orf204Q6ZNR8 217 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 COLCA1Q6ZS62 124 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 MRPL21Q7Z2W9 205 aaKnown RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 SPEM1Q8N4L4 309 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CA5BP1Q8WTZ4 195 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 REPIN1Q9BWE0 567 aaKnown RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 KIAA1324LA8MWY0 1029 aaPredicted RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 METTL15P1P0C7V9 234 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 MDKP21741 143 aaPredicted RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 ZFP36L1Q07352 338 aaKnown RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 IL11RAQ14626 422 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CEACAM21Q3KPI0 293 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 Q6ZRM9 215 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 SSX7Q7RTT5 188 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 OR10J5Q8NHC4 309 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 MRPL30Q8TCC3 161 aaKnown RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 MBD3L1Q8WWY6 194 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 C14orf144Q96I85 54 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 ADGRG7Q96K78 797 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 SSX3Q99909 188 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CABLES2Q9BTV7 478 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 PSENENQ9NZ42 101 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 ERRFI1Q9UJM3 462 aaPredicted RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 OR2W1Q9Y3N9 320 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CHD3Q12873 2000 aaKnown RBP11.03□□□□□ -0.64
DDX11-223ENST00000542838 ZNF407Q9C0G0 2248 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CFAP54Q96N23 3096 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CEBPZOSA8MTT3 80 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 HS3ST1O14792 307 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 SYNGR1O43759 233 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 ZNF880Q6PDB4 577 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CLDN23Q96B33 292 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 SNX22Q96L94 193 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 SGCZQ96LD1 299 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 CACNG5Q9UF02 275 aa11.03□□□□□ -0.64
DDX11-223ENST00000542838 A0A096LPE4 126 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 A0A1W2PPZ6 126 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 SYNGR2O43760 224 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 SLC25A6P12236 298 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 SPINK2P20155 84 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 ARL16Q0P5N6 197 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 ZNF324BQ6AW86 544 aaPredicted RBP11.02□□□□□ -0.65
DDX11-223ENST00000542838 ZNF525Q8N782 197 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 SAP25Q8TEE9 199 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 RDH5Q92781 318 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 RCC1LQ96I51 464 aaKnown RBP11.02□□□□□ -0.65
DDX11-223ENST00000542838 PACRGQ96M98 296 aaPredicted RBP11.02□□□□□ -0.65
DDX11-223ENST00000542838 RNF150Q9ULK6 438 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 C5orf49A4QMS7 147 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 CD300LBA8K4G0 201 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 OPN1MWP04001 364 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 OPN1MW2P0DN77 364 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 OPN1MW3P0DN78 364 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 LILRB2Q8N423 598 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 OR2Y1Q8NGV0 311 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 IL1F10Q8WWZ1 152 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 PSMF1Q92530 271 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 ZNF488Q96MN9 340 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 P2RX4Q99571 388 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 PRO1933Q9H354 126 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.65
DDX11-223ENST00000542838 PLK3Q9H4B4 646 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 OR14J1Q9UGF5 321 aa11.02□□□□□ -0.65
DDX11-223ENST00000542838 CCL4P13236 92 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 MDH2P40926 338 aaKnown RBP11.01□□□□□ -0.65
DDX11-223ENST00000542838 ARF1P84077 181 aaKnown RBP11.01□□□□□ -0.65
DDX11-223ENST00000542838 IFI44Q8TCB0 444 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 HIST1H2AAQ96QV6 131 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 PSMG3Q9BT73 122 aaPredicted RBP11.01□□□□□ -0.65
DDX11-223ENST00000542838 UFSP2Q9NUQ7 469 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 VAX2Q9UIW0 290 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 TRBV24-1A0A075B6N3 115 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 PIGBOS1A0A0B4J2F0 54 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 SMCO3A2RU48 225 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 CYTIPO60759 359 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 MRPL33O75394 65 aaKnown RBP11.01□□□□□ -0.65
DDX11-223ENST00000542838 CD81P60033 236 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 PKIAP61925 76 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 DNLZQ5SXM8 178 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 TNRC6BQ9UPQ9 1833 aaKnown RBP11.01□□□□□ -0.65
DDX11-223ENST00000542838 FREM1Q5H8C1 2179 aa11.01□□□□□ -0.65
DDX11-223ENST00000542838 WDFY3Q8IZQ1 3526 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms