RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 GAGE6Q13070 117 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 LRRC10Q5BKY1 277 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 GCSAMLQ5JQS6 135 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 C9orf40Q8IXQ3 194 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 OR10S1Q8NGN2 331 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 FCAMRQ8WWV6 532 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 RNF183Q96D59 192 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 DUSP23Q9BVJ7 150 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ARRDC1-AS1Q9H2J1 176 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 TMEM106BQ9NUM4 274 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 A0A0G2JK05 382 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 A0A1B0GUS0 222 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 IGSF23A1L1A6 192 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 H0YIG0 161 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 H7C1C5 153 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 DDAH2O95865 285 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 PET100P0DJ07 73 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 IGLC2P0DOY2 106 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 SLC6A9P48067 706 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 TAS2R43P59537 309 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 LCN6P62502 163 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ADAM8P78325 824 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ZNF154Q13106 437 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ZNF721Q8TF20 911 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 KTI12Q96EK9 354 aaPredicted RBP9.6□□□□□ -0.87
CDH3-203ENST00000542274 CTDSP1Q9GZU7 261 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 OR51I2Q9H344 312 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 APMAPQ9HDC9 416 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ASB6Q9NWX5 421 aa9.6□□□□□ -0.87
CDH3-203ENST00000542274 ERRFI1Q9UJM3 462 aaPredicted RBP9.6□□□□□ -0.87
CDH3-203ENST00000542274 ASPMQ8IZT6 3477 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 IGLC7A0M8Q6 106 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 RIIAD1A6NNX1 92 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 H0YL77 283 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 ETV2O00321 342 aaPredicted RBP9.59□□□□□ -0.87
CDH3-203ENST00000542274 UTS2O95399 124 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 SERPINA7P05543 415 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 AMTP48728 403 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 SLC25A1P53007 311 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 HSD52Q0P140 79 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 MPV17LQ2QL34 196 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 SPATA45Q537H7 98 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 C1QL3Q5VWW1 255 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 DPPA3Q6W0C5 159 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 ZNF550Q7Z398 422 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 NEU4Q8WWR8 484 aaPredicted RBP9.59□□□□□ -0.87
CDH3-203ENST00000542274 FBXO4Q9UKT5 387 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 CACNA1CQ13936 2221 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 OR4C45A6NMZ5 311 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 IGLC1P0CG04 106 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 RPS27P42677 84 aaKnown RBP9.59□□□□□ -0.87
CDH3-203ENST00000542274 LTBQ06643 244 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 ZNF585BQ52M93 769 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 CDCP2Q5VXM1 449 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 PEAR1Q5VY43 1037 aaPredicted RBP9.59□□□□□ -0.87
CDH3-203ENST00000542274 LEG1Q6P5S2 330 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 GTF2H5Q6ZYL4 71 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 MARCH3Q86UD3 253 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 VN1R1Q9GZP7 353 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 SRD5A3Q9H8P0 318 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 PLA2G2EQ9NZK7 142 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 CSAG2Q9Y5P2 127 aa9.59□□□□□ -0.87
CDH3-203ENST00000542274 TRBV24-1A0A075B6N3 115 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 IGKV3D-11A0A0A0MRZ8 115 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 IRGMA1A4Y4 181 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 B4DEV8 164 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 F8WDY8 70 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 TNFSF12O43508 249 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 RAD51DO75771 328 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 IGKV3-11P04433 115 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 KLK2P20151 261 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PYCR1P32322 319 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PSG9Q00887 426 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PRR31Q5SQ13 230 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 FNDC7Q5VTL7 733 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 NEGR1Q7Z3B1 354 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 MUC15Q8N387 334 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 FAM169BQ8N8A8 192 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 ZNF501Q96CX3 271 aaPredicted RBP9.58□□□□□ -0.88
CDH3-203ENST00000542274 Q96M85 177 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 NDC1Q9BTX1 674 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 C19orf24Q9BVV8 132 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 TAF9BQ9HBM6 251 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 CDC42EP3Q9UKI2 254 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 ICAM5Q9UMF0 924 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 MRPS16Q9Y3D3 137 aaKnown RBP9.58□□□□□ -0.88
CDH3-203ENST00000542274 IGHV5-10-1A0A0J9YXX1 117 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 CEACAM4O75871 244 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 TNFRSF1AP19438 455 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 TSPOP30536 169 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 CTRLP40313 264 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PPOXP50336 477 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 OR6K6Q8NGW6 343 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms