RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 OR3A4PP47883 348 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 DNASE1L1P49184 302 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 HINT1P49773 126 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 PGGT1BP53609 377 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ATP5J2P56134 94 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 SRSF1Q07955 248 aaKnown RBP eCLIP3.73□□□□□ -1.815e-12■■□□□ 12.5
SNHG1-219ENST00000542112 FUT7Q11130 342 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 GAGE4Q13068 117 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 IL13RA2Q14627 380 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 KIR2DS1Q14954 304 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 OR10J3Q5JRS4 329 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 VAX1Q5SQQ9 334 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 BVES-AS1Q5T3Y7 98 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 TMEM78Q5T7P6 136 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 LYPLAL1Q5VWZ2 237 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 STUMQ69YW2 141 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ZFAND6Q6FIF0 208 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 SPSB3Q6PJ21 355 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 Q6ZWC4 215 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 RPS27LQ71UM5 84 aaKnown RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 CPEB2Q7Z5Q1 589 aaKnown RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 CDC20BQ86Y33 519 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 CA13Q8N1Q1 262 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 SMIM20Q8N5G0 67 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 KRTCAP2Q8N6L1 136 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 OR2T33Q8NG76 320 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 OR2K2Q8NGT1 345 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ATP6V0E2Q8NHE4 81 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 KCNG3Q8TAE7 436 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 MARCH1Q8TCQ1 289 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ACER1Q8TDN7 264 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 C2orf15Q8WU43 125 aaKnown RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 APOBEC4Q8WW27 367 aaKnown RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 PCED1BQ96HM7 432 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ABHD14BQ96IU4 210 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 SEC22AQ96IW7 307 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 DNAJC30Q96LL9 226 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 DGAT2Q96PD7 388 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 GPER1Q99527 375 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 HSPB9Q9BQS6 159 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ANAPC13Q9BS18 74 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 EFCAB11Q9BUY7 163 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 C1QTNF4Q9BXJ3 329 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 WDR61Q9GZS3 305 aaKnown RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 LPAR5Q9H1C0 372 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 DEFB129Q9H1M3 183 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 TMEM133Q9H2Q1 129 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 MS4A6AQ9H2W1 248 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 MED20Q9H944 212 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 LYRM4Q9HD34 91 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 TMEM160Q9NX00 188 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 SS18L2Q9UHA2 77 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 ERRFI1Q9UJM3 462 aaPredicted RBP3.73□□□□□ -1.81
SNHG1-219ENST00000542112 WASHC3Q9Y3C0 194 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 TRAPPC1Q9Y5R8 145 aa3.73□□□□□ -1.81
SNHG1-219ENST00000542112 TRBV4-1A0A0J9YWV2 114 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 TMEM8BA6NDV4 472 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 DPRXA6NFQ7 191 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 A6NIN4 97 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 GLOD5A6NK44 160 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 ZNF732B4DXR9 585 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 H0YIZ8 118 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 H7C1C5 153 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 NKX2-8O15522 239 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 ERI3O43414 337 aaKnown RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 XRCC2O43543 280 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 SYNGR3O43761 229 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 GCM2O75603 506 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 DEDDO75618 318 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 TNFP01375 233 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 APOA2P02652 100 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 CD3DP04234 171 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 CFIP05156 583 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 GPX1P07203 203 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 OR9G9P0C7N8 305 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 CT45A6P0DMU7 189 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 CT45A5P0DMU8 189 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 CT45A7P0DMV0 189 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 COX7A2P14406 83 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 RPL15P61313 204 aaKnown RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 RPS28P62857 69 aaKnown RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 SLC35B1P78383 322 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 ZXDAP98168 799 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 LTBQ06643 244 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 KLRD1Q13241 179 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 PPP1R1AQ13522 171 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 RAB32Q13637 225 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 ICAM4Q14773 271 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 EXOSC7Q15024 291 aaKnown RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 SRSF7Q16629 238 aaKnown RBP eCLIP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 ZXDCQ2QGD7 858 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 MPV17LQ2QL34 196 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 LRRC75BQ2VPJ9 315 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 ZNF791Q3KP31 576 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 SLC25A53Q5H9E4 307 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 CT45A1Q5HYN5 189 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 WDR25Q64LD2 544 aaPredicted RBP3.72□□□□□ -1.81
SNHG1-219ENST00000542112 PAQR9Q6ZVX9 377 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 BHLHA9Q7RTU4 235 aa3.72□□□□□ -1.81
SNHG1-219ENST00000542112 TMEM150AQ86TG1 271 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms