RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 LIAT1Q6ZQX7 453 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 SLC16A12Q6ZSM3 486 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 C5orf24Q7Z6I8 188 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 NR2C2APQ86WQ0 139 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 TMEM219Q86XT9 240 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 FAM89BQ8N5H3 189 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 FAM3DQ96BQ1 224 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 FAAP24Q9BTP7 215 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 ABCB10Q9NRK6 738 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 MBNL3Q9NUK0 354 aaKnown RBP13.58□□□□□ -0.24
CD9-209ENST00000540891 GFOD1Q9NXC2 390 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 FBLN5Q9UBX5 448 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 RNF114Q9Y508 228 aa13.58□□□□□ -0.24
CD9-209ENST00000540891 H3BUI4 141 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 SOCS1O15524 211 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 MYL9P24844 172 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 FGF9P31371 208 aaPredicted RBP13.57□□□□□ -0.24
CD9-209ENST00000540891 PSMD7P51665 324 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 Q6ZPA2 131 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 OR52M1Q8NGK5 317 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 OR1L1Q8NH94 360 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 CREB3L1Q96BA8 519 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 NEDD4LQ96PU5 975 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 TXNL4BQ9NX01 149 aaKnown RBP13.57□□□□□ -0.24
CD9-209ENST00000540891 STEAP1Q9UHE8 339 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 STUB1Q9UNE7 303 aa13.57□□□□□ -0.24
CD9-209ENST00000540891 IGHV3-43A0A0B4J1X8 118 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 A0A1W2PPE3 182 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 IFITM5A6NNB3 132 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 SDCBPO00560 298 aaPredicted RBP13.56□□□□□ -0.24
CD9-209ENST00000540891 PDCD5O14737 125 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 HBZP02008 142 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 IGHV3-43DP0DP04 118 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 CD24P25063 80 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 BLVRBP30043 206 aaPredicted RBP13.56□□□□□ -0.24
CD9-209ENST00000540891 DIAPH2-AS1Q14236 149 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 NEDD8Q15843 81 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 C6orf183Q5T699 404 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 OR51E2Q9H255 320 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 RAB18Q9NP72 206 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 SIGLEC9Q9Y336 463 aa13.56□□□□□ -0.24
CD9-209ENST00000540891 TMEM272A0A1B0GTI8 110 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 NAPSAO96009 420 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 RAB3BP20337 219 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 CEACAM3P40198 252 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 KIR2DS4P43632 304 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 TMEM50BP56557 158 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 URM1Q9BTM9 101 aaKnown RBP13.55□□□□□ -0.24
CD9-209ENST00000540891 RANBP3Q9H6Z4 567 aaPredicted RBP13.55□□□□□ -0.24
CD9-209ENST00000540891 TAF9BQ9HBM6 251 aa13.55□□□□□ -0.24
CD9-209ENST00000540891 AMMECR1Q9Y4X0 333 aaPredicted RBP13.55□□□□□ -0.24
CD9-209ENST00000540891 A0A0B4J203 849 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 A0A1W2PPI3 338 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 SMIM30A4D0T7 59 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 OOSP1A8MZH6 123 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 SLC31A2O15432 143 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 EFNB2P52799 333 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 PLAC9Q5JTB6 97 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 ZNF880Q6PDB4 577 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 TRAT1Q6PIZ9 186 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 PRR18Q8N4B5 295 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 LINC00311Q8N616 119 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 C8orf31Q8N9H6 132 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 ZNF439Q8NDP4 499 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 RPEQ96AT9 228 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 CITED1Q99966 193 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 NPFFR1Q9GZQ6 430 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 ZNF702PQ9H963 129 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 PLEKHJ1Q9NW61 149 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 PITPNC1Q9UKF7 332 aa13.54□□□□□ -0.24
CD9-209ENST00000540891 SPINT2O43291 252 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 BRS3P32247 399 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 VEGFCP49767 419 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 ZNF134P52741 427 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 HMGN3Q15651 99 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 Q3ZCU0 254 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 CCDC144NLQ6NUI1 221 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 ZNF554Q86TJ5 538 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 OR10V1Q8NGI7 309 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 OR4C13Q8NGP0 309 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 CFHR4Q92496 578 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 TOMM40LQ969M1 308 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 OCSTAMPQ9BR26 566 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 HDHD3Q9BSH5 251 aaPredicted RBP13.53□□□□□ -0.24
CD9-209ENST00000540891 RNF167Q9H6Y7 350 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 AK3Q9UIJ7 227 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 HSF4Q9ULV5 492 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 SSR3Q9UNL2 185 aa13.53□□□□□ -0.24
CD9-209ENST00000540891 FAM90A9PA6NNJ1 464 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 SLC2A2P11168 524 aaPredicted RBP13.52□□□□□ -0.25
CD9-209ENST00000540891 GADD45AP24522 165 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 GNMTQ14749 295 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 TMEM30BQ3MIR4 351 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 MOGAT2Q3SYC2 334 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 Q6ZS46 218 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 Q8N2B8 174 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 OR52L2PQ8NGH6 319 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 OR10X1Q8NGY0 326 aa13.52□□□□□ -0.25
CD9-209ENST00000540891 ST6GALNAC6Q969X2 333 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms