RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 HIST2H2BCQ6DN03 193 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 ITLN1Q8WWA0 313 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 GALNT14Q96FL9 552 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 DIRC2Q96SL1 478 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 PDCD10Q9BUL8 212 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 NAA60Q9H7X0 242 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 HEXA-AS1Q9H8Q6 139 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 IL19Q9UHD0 177 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 WIPI2Q9Y4P8 454 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 SPG11Q96JI7 2443 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 TRBV6-7A0A0A0MS04 114 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 TEX13DA0A0J9YY54 714 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 TMEM30CPA0ZSE6 113 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 OVOL3O00110 214 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 PSPNO60542 156 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 EGR1P18146 543 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 CXCL2P19875 107 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 C4BPBP20851 252 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 TNFAIP6P98066 277 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 HOXA4Q00056 320 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 PAX5Q02548 391 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 HMGN3Q15651 99 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 SLC35E4Q6ICL7 350 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 GSG1LQ6UXU4 331 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 H1FOOQ8IZA3 346 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 FAM185AQ8N0U4 392 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 CCDC71LQ8N9Z2 235 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 OR5T2Q8NGG2 359 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 RTN4IP1Q8WWV3 396 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-204ENST00000540846 MS4A5Q9H3V2 200 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 DYNLRB1Q9NP97 96 aa10.43□□□□□ -0.74
SMAD3-204ENST00000540846 HECTD1Q9ULT8 2610 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 USF3Q68DE3 2245 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 FXYD6-FXYD2A0A087WZ82 144 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 FAM25EA8MYX2 175 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 ATP6V1G1O75348 118 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 ADAP1O75689 374 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 SLC25A4P12235 298 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 RPA2P15927 270 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 SSTR2P30874 369 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 OR3A1P47881 315 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 RND3P61587 244 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 CCL8P80075 99 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 CYCSP99999 105 aaKnown RBP10.42□□□□□ -0.74
SMAD3-204ENST00000540846 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 TMEM65Q6PI78 240 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 TGIF2LYQ8IUE0 185 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 GCSAMQ8N6F7 178 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 PPP1R1CQ8WVI7 109 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 SUCNR1Q9BXA5 334 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 NMES1Q9C002 83 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 GCM1Q9NP62 436 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 PRR13Q9NZ81 148 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 COMMD9Q9P000 198 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 LAMP3Q9UQV4 416 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 KCNIP3Q9Y2W7 256 aa10.42□□□□□ -0.74
SMAD3-204ENST00000540846 POLQO75417 2590 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 IGKV1D-13A0A0B4J2D9 117 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 C5orf51A6NDU8 294 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 L7N2F9 121 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 ARPC5O15511 151 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 LHBP01229 141 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 IGKV1-13P0DP09 117 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 TNFSF4P23510 183 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 COL10A1Q03692 680 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 TESK1Q15569 626 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 ZNF767PQ75MW2 155 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 CD177Q8N6Q3 437 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 LRTM2Q8N967 370 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 OR11L1Q8NGX0 322 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 OR10J5Q8NHC4 309 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 COQ2Q96H96 371 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 SEC22AQ96IW7 307 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 KIRREL1Q96J84 757 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 VRK1Q99986 396 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-204ENST00000540846 ITGB1BP2Q9UKP3 347 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 TRAPPC2LQ9UL33 140 aa10.41□□□□□ -0.74
SMAD3-204ENST00000540846 NBPF19A0A087WUL8 3843 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 C13orf42A0A1B0GVH6 325 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 GPR31O00270 319 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 TSC22D2O75157 780 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 ZNF737O75373 536 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 PSG2P11465 335 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 GNRHRP30968 328 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 KRTAP10-9P60411 292 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 TMEM187Q14656 261 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 NDUFA5Q16718 116 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 ZNF787Q6DD87 383 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 C11orf87Q6NUJ2 197 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 ZNF565Q8N9K5 539 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 Q8TCH9 128 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 ERGIC1Q969X5 290 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 MARVELD3Q96A59 401 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 SLC5A7Q9GZV3 580 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 DCAF16Q9NXF7 216 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 METRNQ9UJH8 293 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms