RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SERPINE3A8MV23 424 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 CLPXO76031 633 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 SCGNO76038 276 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 MELTFP08582 738 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 FCGR3AP08637 254 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 GUCA2AQ02747 115 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 HMGN3Q15651 99 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 HACD4Q5VWC8 232 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 RUSC1-AS1Q66K80 236 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 C1orf122Q6ZSJ8 110 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 OR1L1Q8NH94 360 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 ZNF418Q8TF45 676 aaPredicted RBP13.61□□□□□ -0.23
UBC-208ENST00000540700 LHX4Q969G2 390 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 S100A16Q96FQ6 103 aaKnown RBP13.61□□□□□ -0.23
UBC-208ENST00000540700 C6orf62Q9GZU0 229 aaPredicted RBP13.61□□□□□ -0.23
UBC-208ENST00000540700 UNKLQ9H9P5 680 aaKnown RBP13.61□□□□□ -0.23
UBC-208ENST00000540700 Q9N2K0 584 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 C12orf4Q9NQ89 552 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 TRRAPQ9Y4A5 3859 aa13.61□□□□□ -0.23
UBC-208ENST00000540700 GSTP1P09211 210 aaKnown RBP13.6□□□□□ -0.23
UBC-208ENST00000540700 LTC4SQ16873 150 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 CNPY1Q3B7I2 92 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 PDLIM3Q53GG5 364 aaPredicted RBP13.6□□□□□ -0.23
UBC-208ENST00000540700 TMEM69Q5SWH9 247 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 CNIH2Q6PI25 160 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 HEPN1Q6WQI6 88 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 SETD6Q8TBK2 473 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 ARL11Q969Q4 196 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 KIRREL1Q96J84 757 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 METTL8Q9H825 291 aaKnown RBP13.6□□□□□ -0.23
UBC-208ENST00000540700 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 CHMP1AQ9HD42 196 aaPredicted RBP13.6□□□□□ -0.23
UBC-208ENST00000540700 EXTL2Q9UBQ6 330 aa13.6□□□□□ -0.23
UBC-208ENST00000540700 IGKV1-6A0A0C4DH72 117 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 A0A1W2PRD5 423 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 A0A1W2PRF3 423 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 A0A1W2PRM7 423 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 MEIOCA2RUB1 952 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 FAM25AB3EWG3 89 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 FAM25CB3EWG5 89 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 FAM25GB3EWG6 89 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 TRIM77I1YAP6 450 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 RGS5O15539 181 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 HBZP02008 142 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 RBP4P02753 201 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 CD3GP09693 182 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 COX7A1P24310 79 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 DEFA6Q01524 100 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 ARFRP1Q13795 201 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 LDLRAD2Q5SZI1 272 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 ZNF565Q8N9K5 539 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 FAM216AQ8WUB2 273 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 LEAP2Q969E1 77 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 SUCNR1Q9BXA5 334 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 GAL3ST2Q9H3Q3 398 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 ZNF286AQ9HBT8 521 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 IDI2-AS1Q9NZ38 188 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 ZNRD1Q9P1U0 126 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 SESN1Q9Y6P5 492 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 WNK2Q9Y3S1 2297 aa13.59□□□□□ -0.23
UBC-208ENST00000540700 IGHV3-43A0A0B4J1X8 118 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 A0A1W2PPH5 198 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 MEIS3P1A6NDR6 274 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 F2RL2O00254 374 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 ORC5O43913 435 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 IGHV3-7P01780 117 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 SCTP09683 121 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 IGHV3-43DP0DP04 118 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 LOXL3P58215 753 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 HLA-DRB3P79483 266 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 GNMTQ14749 295 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 HERPUD1Q15011 391 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 PNLIPRP3Q17RR3 467 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 C6orf183Q5T699 404 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 BRD3OSQ6XYD6 125 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 BCL6BQ8N143 479 aaPredicted RBP13.58□□□□□ -0.24
UBC-208ENST00000540700 PRR18Q8N4B5 295 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 GVQW1Q8N7I0 195 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 SOSTQ9BQB4 213 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 RIMS4Q9H426 269 aaPredicted RBP13.58□□□□□ -0.24
UBC-208ENST00000540700 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
UBC-208ENST00000540700 MRPS7Q9Y2R9 242 aaKnown RBP13.58□□□□□ -0.24
UBC-208ENST00000540700 KIAA2026Q5HYC2 2103 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 FCER2P06734 321 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 GZMHP20718 246 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 TNFSF8P32971 234 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 MNDAP41218 407 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 GNG2P59768 71 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 SCGB2A2Q13296 93 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 SNX29P2Q8IUI4 249 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 OR52L2PQ8NGH6 319 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 C17orf50Q8WW18 174 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 PHF21AQ96BD5 680 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 AJUBAQ96IF1 538 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 ABHD1Q96SE0 405 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 TMEM133Q9H2Q1 129 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 MMP27Q9H306 513 aa13.57□□□□□ -0.24
UBC-208ENST00000540700 ZNF69Q9UC07 566 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms