RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 MT-ND4P03905 459 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 MAS1P04201 325 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CDK1P06493 297 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 SNRNP70P08621 437 aaKnown RBP8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CD28P10747 220 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 MGMTP16455 207 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CD1BP29016 333 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 GNG10P50151 68 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 GP2P55259 537 aaKnown RBP8.3□□□□□ -1.08
CDCA3-208ENST00000540683 RPS11P62280 158 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CD83Q01151 205 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 DCTN2Q13561 401 aaKnown RBP8.3□□□□□ -1.08
CDCA3-208ENST00000540683 LDLRAD2Q5SZI1 272 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 MOB3BQ86TA1 216 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 IZUMO1Q8IYV9 350 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 C11orf44Q8N8P7 122 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 ZNF485Q8NCK3 441 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 RFESDQ8TAC1 157 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 UFD1Q92890 307 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CITED2Q99967 270 aaPredicted RBP8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CHCHD6Q9BRQ6 235 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 URM1Q9BTM9 101 aaKnown RBP8.3□□□□□ -1.08
CDCA3-208ENST00000540683 CENPOQ9BU64 300 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 SELENOIQ9C0D9 397 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 ZFP57Q9NU63 452 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 GFOD1Q9NXC2 390 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 PEX16Q9Y5Y5 336 aa8.3□□□□□ -1.08
CDCA3-208ENST00000540683 PSMB11A5LHX3 300 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 PTGES3LE9PB15 166 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 SC5DO75845 299 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 OR5H8P0DN80 308 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 SSTR5P35346 364 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 GABPB1Q06547 395 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 HABP2Q14520 560 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 LTC4SQ16873 150 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 ACSM3Q53FZ2 586 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 HSD17B12Q53GQ0 312 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 KHDC1LQ5JSQ8 128 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 RBM48Q5RL73 367 aaKnown RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 C6orf141Q5SZD1 244 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 SYT6Q5T7P8 510 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 MOB1BQ7L9L4 216 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 TGIF2LXQ8IUE1 241 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 DRAM1Q8N682 238 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 OR56B4Q8NH76 319 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 PLPPR1Q8TBJ4 325 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 WIPF2Q8TF74 440 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 GALMQ96C23 342 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 RCC1LQ96I51 464 aaKnown RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 OR5M11Q96RB7 305 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 MCRIP2Q9BUT9 160 aaKnown RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 ISYNA1Q9NPH2 558 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 LIN7CQ9NUP9 197 aaKnown RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 FKBP14Q9NWM8 211 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 JPT1Q9UK76 154 aa8.29□□□□□ -1.08
CDCA3-208ENST00000540683 SIRT4Q9Y6E7 314 aaPredicted RBP8.29□□□□□ -1.08
CDCA3-208ENST00000540683 TRAV8-7A0A075B6U6 113 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 IGHV1-3A0A0C4DH29 117 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 PNMA8CA0A1B0GUJ8 204 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 NCBP2LA6PVI3 153 aaKnown RBP8.28□□□□□ -1.08
CDCA3-208ENST00000540683 SERPINE3A8MV23 424 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 AP4M1O00189 453 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 MOSP00540 346 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 LALBAP00709 142 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 IGKV1D-33P01593 117 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 IGKV1-33P01594 117 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 GNAO1P09471 354 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 SRMP19623 302 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 GDNFP39905 211 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 ZNF137PP52743 207 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 HTD2P86397 168 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 EBI3Q14213 229 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 MED22Q15528 200 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 LY6G6FQ5SQ64 297 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 KPRPQ5T749 579 aaPredicted RBP8.28□□□□□ -1.08
CDCA3-208ENST00000540683 RNF144BQ7Z419 303 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 SLC35E3Q7Z769 313 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 GAPTQ8N292 157 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 ZFP41Q8N8Y5 198 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 SGCDQ92629 289 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 Q96M66 194 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 RASL11BQ9BPW5 248 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 TMEM59Q9BXS4 323 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 OR2S2Q9NQN1 319 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 NECAP2Q9NVZ3 263 aa8.28□□□□□ -1.08
CDCA3-208ENST00000540683 A0A1W2PPK0 400 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 C15orf65H3BRN8 121 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 RGS10O43665 173 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 CD24P25063 80 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 HTR2CP28335 458 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 LOXL3P58215 753 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 MRPS15P82914 257 aaKnown RBP8.27□□□□□ -1.09
CDCA3-208ENST00000540683 SAMD5Q5TGI4 173 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 FAM71F2Q6NXP2 309 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 TEX38Q6PEX7 206 aa8.27□□□□□ -1.09
CDCA3-208ENST00000540683 SLC25A48Q6ZT89 311 aaKnown RBP8.27□□□□□ -1.09
CDCA3-208ENST00000540683 CEACAM19Q7Z692 300 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms