RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 RFESDQ8TAC1 157 aa12.04□□□□□ -0.48
INO80E-203ENST00000540562 C10orf35Q96D05 121 aa12.04□□□□□ -0.48
INO80E-203ENST00000540562 DECR2Q9NUI1 292 aa12.04□□□□□ -0.48
INO80E-203ENST00000540562 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
INO80E-203ENST00000540562 IGHV3-43A0A0B4J1X8 118 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 A0A1W2PNU3 283 aaPredicted RBP12.03□□□□□ -0.48
INO80E-203ENST00000540562 NUDT19A8MXV4 375 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 C9orf172C9J069 976 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 CER1O95813 267 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 IGHV3-43DP0DP04 118 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 MMP9P14780 707 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 WNT5AP41221 380 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 LHX2P50458 406 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 PLP2Q04941 152 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 TMEM211Q6ICI0 200 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 GPR146Q96CH1 333 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 PBDC1Q9BVG4 233 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 REPIN1Q9BWE0 567 aaKnown RBP12.03□□□□□ -0.48
INO80E-203ENST00000540562 PLK3Q9H4B4 646 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 TRAV24A0A0B4J272 114 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 PQLC2LA1A4F0 135 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 K7N7A8 449 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 ZNF816Q0VGE8 651 aaPredicted RBP12.03□□□□□ -0.48
INO80E-203ENST00000540562 C1QTNF5Q9BXJ0 243 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 TAAR3PQ9P1P4 343 aa12.03□□□□□ -0.48
INO80E-203ENST00000540562 ANKRD30BLA7E2S9 258 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 KRASP01116 189 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 TUBG1P23258 451 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 COL8A2P25067 703 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 DUSP3P51452 185 aaPredicted RBP12.02□□□□□ -0.48
INO80E-203ENST00000540562 FGF12P61328 243 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 GFI1BQ5VTD9 330 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 OR2J1Q9GZK6 312 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 ZNF703Q9H7S9 590 aaPredicted RBP12.02□□□□□ -0.48
INO80E-203ENST00000540562 PLEKHF2Q9H8W4 249 aa12.02□□□□□ -0.48
INO80E-203ENST00000540562 WNT9BO14905 357 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 DEGS1O15121 323 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 SERPINA7P05543 415 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 CXCL1P09341 107 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 CLDN18P56856 261 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 DLK1P80370 383 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.49
INO80E-203ENST00000540562 CLN3Q13286 438 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 KIAA0141Q14154 515 aaPredicted RBP12.02□□□□□ -0.49
INO80E-203ENST00000540562 MDP1Q86V88 176 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 WDR5BQ86VZ2 330 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 C15orf54Q8N8G6 183 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 TMPRSS5Q9H3S3 457 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 RELNP78509 3460 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 AGFG2O95081 481 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 CD55P08174 381 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 ARL16Q0P5N6 197 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 ZNF266Q14584 549 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 TESK1Q15569 626 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 CEACAM21Q3KPI0 293 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 AURKAIP1Q9NWT8 199 aaPredicted RBP12.02□□□□□ -0.49
INO80E-203ENST00000540562 WSB1Q9Y6I7 421 aa12.02□□□□□ -0.49
INO80E-203ENST00000540562 CYB5BO43169 146 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 MT-ND4LP03901 98 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 APLNRP35414 380 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 SPSB3Q6PJ21 355 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 SSX7Q7RTT5 188 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 ZNF429Q86V71 674 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
INO80E-203ENST00000540562 LYRM2Q9NU23 88 aaPredicted RBP12.01□□□□□ -0.49
INO80E-203ENST00000540562 ACACAQ13085 2346 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 CA11O75493 328 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 CLN5O75503 358 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 ARG2P78540 354 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 LILRB2Q8N423 598 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 CNEP1R1Q8N9A8 125 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 PLPPR1Q8TBJ4 325 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 DLL3Q9NYJ7 618 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
INO80E-203ENST00000540562 SPTA1P02549 2419 aa12.01□□□□□ -0.49
INO80E-203ENST00000540562 ABCA1O95477 2261 aa12□□□□□ -0.49
INO80E-203ENST00000540562 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
INO80E-203ENST00000540562 PRSS44E7EML9 344 aa12□□□□□ -0.49
INO80E-203ENST00000540562 OR8U8P0C7N1 319 aa12□□□□□ -0.49
INO80E-203ENST00000540562 VDAC1P21796 283 aa12□□□□□ -0.49
INO80E-203ENST00000540562 SSPNQ14714 243 aa12□□□□□ -0.49
INO80E-203ENST00000540562 ZNF880Q6PDB4 577 aa12□□□□□ -0.49
INO80E-203ENST00000540562 C1orf210Q8IVY1 113 aa12□□□□□ -0.49
INO80E-203ENST00000540562 APOBEC3DQ96AK3 386 aaPredicted RBP12□□□□□ -0.49
INO80E-203ENST00000540562 TINAGQ9UJW2 476 aa12□□□□□ -0.49
INO80E-203ENST00000540562 CDS2O95674 445 aa12□□□□□ -0.49
INO80E-203ENST00000540562 MEOX1P50221 254 aa12□□□□□ -0.49
INO80E-203ENST00000540562 ERVFRD-1P60508 538 aa12□□□□□ -0.49
INO80E-203ENST00000540562 FIP1L1Q6UN15 594 aaKnown RBP12□□□□□ -0.49
INO80E-203ENST00000540562 ASCL4Q6XD76 172 aa12□□□□□ -0.49
INO80E-203ENST00000540562 OR10V1Q8NGI7 309 aa12□□□□□ -0.49
INO80E-203ENST00000540562 SSX3Q99909 188 aa12□□□□□ -0.49
INO80E-203ENST00000540562 MIOXQ9UGB7 285 aa12□□□□□ -0.49
INO80E-203ENST00000540562 NXPH2O95156 264 aa12□□□□□ -0.49
INO80E-203ENST00000540562 NAPSAO96009 420 aa12□□□□□ -0.49
INO80E-203ENST00000540562 F2RP25116 425 aa12□□□□□ -0.49
INO80E-203ENST00000540562 CEACAM6P40199 344 aa12□□□□□ -0.49
INO80E-203ENST00000540562 PAX9P55771 341 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms