RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	SLC25A48	Q6ZT89	311 aa	Known RBP	10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ZNF554	Q86TJ5	538 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	TGIF2LX	Q8IUE1	241 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	NKAIN3	Q8N8D7	197 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	CHPT1	Q8WUD6	406 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	TFAP2C	Q92754	450 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	MUL1	Q969V5	352 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	EAF1	Q96JC9	268 aa	Predicted RBP	10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475		Q96M66	194 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	PLSCR3	Q9NRY6	295 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ZFP57	Q9NU63	452 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	MBNL3	Q9NUK0	354 aa	Known RBP	10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475	GHRL	Q9UBU3	117 aa		10.36	□□□□□ -0.75
SEMA4D-223	ENST00000540475		A0A1W2PPK0	400 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475		A0A1W2PRX2	142 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	AIP	O00170	330 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	DUS4L	O95620	317 aa	Known RBP	10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	PRB2	P02812	416 aa	Predicted RBP	10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	PF4V1	P10720	104 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	IGLL1	P15814	213 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ZNF134	P52741	427 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	GP2	P55259	537 aa	Known RBP	10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	HES1	Q14469	280 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	LY6G6F	Q5SQ64	297 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	SYT6	Q5T7P8	510 aa	Predicted RBP	10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	RAB12	Q6IQ22	244 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	TRAT1	Q6PIZ9	186 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	STX19	Q8N4C7	294 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	JAGN1	Q8N5M9	183 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	COMMD1	Q8N668	190 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	LINC00482	Q8N8I6	264 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	CCDC107	Q8WV48	283 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	RCC1L	Q96I51	464 aa	Known RBP	10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	RAB9B	Q9NP90	201 aa		10.35	□□□□□ -0.75
SEMA4D-223	ENST00000540475	TXNL1	O43396	289 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	MAS1	P04201	325 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	MGMT	P16455	207 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	FUT3	P21217	361 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	MAPK3	P27361	379 aa	Predicted RBP	10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	SLC35A2	P78381	396 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	EGFEM1P	Q0D2K5	195 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	HNF4G	Q14541	408 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	CT45A1	Q5HYN5	189 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	C9orf152	Q5JTZ5	239 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	C6orf141	Q5SZD1	244 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	C6orf183	Q5T699	404 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	AWAT2	Q6E213	333 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ETV3L	Q6ZN32	361 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	AHSA2	Q719I0	299 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ZNF329	Q86UD4	541 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	MS4A15	Q8N5U1	240 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	RNF152	Q8N8N0	203 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475		Q8N9W7	124 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	OR8H1	Q8NGG4	311 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	OR2T10	Q8NGZ9	312 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	CT45A3	Q8NHU0	189 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	SGCD	Q92629	289 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	SELENOI	Q9C0D9	397 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ABCG5	Q9H222	651 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	LIN7C	Q9NUP9	197 aa	Known RBP	10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ETAA1	Q9NY74	926 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	ZNF580	Q9UK33	172 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	PEX16	Q9Y5Y5	336 aa		10.34	□□□□□ -0.75
SEMA4D-223	ENST00000540475	LINC01548	A6NM66	108 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MYL12B	O14950	172 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SLC31A2	O15432	143 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SPINT2	O43291	252 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	HBZ	P02008	142 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	CDK1	P06493	297 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	RCC1	P18754	421 aa	Predicted RBP	10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	IL3RA	P26951	378 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	THBS3	P49746	956 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	RPL23A	P62750	156 aa	Known RBP	10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	HTD2	P86397	168 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	GPR50	Q13585	617 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MORN2	Q502X0	79 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	C1orf100	Q5SVJ3	147 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SLC35E3	Q7Z769	313 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MOB3B	Q86TA1	216 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	LRRTM1	Q86UE6	522 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	STPG2	Q8N412	459 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	BPIFB6	Q8NFQ5	453 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	NEK7	Q8TDX7	302 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	PHYHIP	Q92561	330 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	NOL4L	Q96MY1	436 aa	Predicted RBP	10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	BANF2	Q9H503	90 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	TRAPPC2L	Q9UL33	140 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	ERGIC3	Q9Y282	383 aa		10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	LSM2	Q9Y333	95 aa	Known RBP	10.33	□□□□□ -0.76
SEMA4D-223	ENST00000540475	IGHV3-43	A0A0B4J1X8	118 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	PNMA8C	A0A1B0GUJ8	204 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	SERPINE3	A8MV23	424 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475		H0YHG0	523 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	LANCL1	O43813	399 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	MOS	P00540	346 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	PF4	P02776	101 aa		10.32	□□□□□ -0.76
SEMA4D-223	ENST00000540475	UBB	P0CG47	229 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms