RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FAM89BQ8N5H3 189 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 NEDD4LQ96PU5 975 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 MMP28Q9H239 520 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 OR51E2Q9H255 320 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 C16orf95Q9H693 158 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 STEAP1Q9UHE8 339 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 STUB1Q9UNE7 303 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 TCF19Q9Y242 345 aa14.72□□□□□ -0.05
SNRPA1-203ENST00000540017 A0A0B4J203 849 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 TMEM272A0A1B0GTI8 110 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 CLPSL1A2RUU4 121 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 FOXI3A8MTJ6 420 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 LEUTXA8MZ59 168 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 F2RL2O00254 374 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 PDCD5O14737 125 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 CA11O75493 328 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 RAB3BP20337 219 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 MYL9P24844 172 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 CD24P25063 80 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 BLVRBP30043 206 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 FGF9P31371 208 aaPredicted RBP14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 PSMD7P51665 324 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 KRTAP10-3P60369 221 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 OR1L1Q8NH94 360 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 ABCB10Q9NRK6 738 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 MBNL3Q9NUK0 354 aaKnown RBP14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 FBLN5Q9UBX5 448 aa14.71□□□□□ -0.05
SNRPA1-203ENST00000540017 A0A1B0GUS0 222 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 IFITM5A6NNB3 132 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 H3BUI4 141 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 SDCBPO00560 298 aaPredicted RBP14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 HBZP02008 142 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 TMEM50BP56557 158 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 DIAPH2-AS1Q14236 149 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 SLC16A12Q6ZSM3 486 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 OR52M1Q8NGK5 317 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 WFDC12Q8WWY7 111 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 RNF167Q9H6Y7 350 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 GFOD1Q9NXC2 390 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 SIGLEC9Q9Y336 463 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 RNF114Q9Y508 228 aa14.7□□□□□ -0.06
SNRPA1-203ENST00000540017 GADD45AP24522 165 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 VEGFCP49767 419 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 EFNB2P52799 333 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 PROK1P58294 105 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 C6orf183Q5T699 404 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 PRR18Q8N4B5 295 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 URM1Q9BTM9 101 aaKnown RBP14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 TAF9BQ9HBM6 251 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 PLEKHJ1Q9NW61 149 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 SSR3Q9UNL2 185 aa14.69□□□□□ -0.06
SNRPA1-203ENST00000540017 SLC31A2O15432 143 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 SPINT2O43291 252 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 RRP9O43818 475 aaKnown RBP14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 NAPSAO96009 420 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 SLC2A2P11168 524 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 CD36P16671 472 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 CEACAM3P40198 252 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 SHISA2Q6UWI4 295 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 LIAT1Q6ZQX7 453 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 ZNF439Q8NDP4 499 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 TSPAN14Q8NG11 270 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 OR10V1Q8NGI7 309 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 CREB3L1Q96BA8 519 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 CHCHD6Q9BRQ6 235 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 HDHD3Q9BSH5 251 aaPredicted RBP14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 LIN7BQ9HAP6 207 aa14.68□□□□□ -0.06
SNRPA1-203ENST00000540017 TNFAIP8O95379 198 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 ZNF134P52741 427 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 PLAC9Q5JTB6 97 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 TRAT1Q6PIZ9 186 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 TOMM40LQ969M1 308 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 ARHGAP5-AS1Q96IT6 56 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 PECRQ9BY49 303 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 RAB18Q9NP72 206 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 AK3Q9UIJ7 227 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 RAB22AQ9UL26 194 aa14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 AMMECR1Q9Y4X0 333 aaPredicted RBP14.67□□□□□ -0.06
SNRPA1-203ENST00000540017 A0A1W2PPI3 338 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 OOSP1A8MZH6 123 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 CLEC2LP0C7M8 214 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 KIR2DS4P43632 304 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 MADCAM1Q13477 382 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 GNMTQ14749 295 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 MOGAT2Q3SYC2 334 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 ZNF880Q6PDB4 577 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 Q6ZS46 218 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 LINC00311Q8N616 119 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 C8orf31Q8N9H6 132 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 OR52L2PQ8NGH6 319 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 OR10X1Q8NGY0 326 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 RPEQ96AT9 228 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 CENPOQ9BU64 300 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 ZNF696Q9H7X3 374 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 ZNF702PQ9H963 129 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 GNG12Q9UBI6 72 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 PITPNC1Q9UKF7 332 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 HSF4Q9ULV5 492 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 KCNK7Q9Y2U2 307 aa14.66□□□□□ -0.06
SNRPA1-203ENST00000540017 A0A087WXM4 84 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms