RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 KCNIP1Q9NZI2 227 aa12.1□□□□□ -0.47
UBE3B-211ENST00000539843 EBAG9O00559 213 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 CA11O75493 328 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 OR5H8P0DN80 308 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 GPR12P47775 334 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 EGFEM1PQ0D2K5 195 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 SMN1Q16637 294 aaKnown RBP12.09□□□□□ -0.47
UBE3B-211ENST00000539843 ZNF497Q6ZNH5 498 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 OR8U1Q8NH10 309 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 CYGBQ8WWM9 190 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 GHSRQ92847 366 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 ABCG5Q9H222 651 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 LINC00527Q9UJ94 153 aa12.09□□□□□ -0.47
UBE3B-211ENST00000539843 MRPS28Q9Y2Q9 187 aaKnown RBP12.09□□□□□ -0.47
UBE3B-211ENST00000539843 SIRT4Q9Y6E7 314 aaPredicted RBP12.09□□□□□ -0.47
UBE3B-211ENST00000539843 IGHV3-43A0A0B4J1X8 118 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 IGHV3-72A0A0B4J1Y9 119 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 C15orf65H3BRN8 121 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 OGG1O15527 345 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 WBP4O75554 376 aaKnown RBP12.08□□□□□ -0.48
UBE3B-211ENST00000539843 MT-ND4P03905 459 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 IGHV3-43DP0DP04 118 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 FSTP19883 344 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 MAPK3P27361 379 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-211ENST00000539843 SYT6Q5T7P8 510 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-211ENST00000539843 XAF1Q6GPH4 301 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 GLIPR1L1Q6UWM5 242 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 CDH26Q8IXH8 852 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 PRR18Q8N4B5 295 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 RTN4IP1Q8WWV3 396 aaPredicted RBP12.08□□□□□ -0.48
UBE3B-211ENST00000539843 MUL1Q969V5 352 aa12.08□□□□□ -0.48
UBE3B-211ENST00000539843 TRBV5-5A0A0J9YX44 114 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 FAM90A7PA6NKC0 464 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 FAM90A23PA8MXZ1 464 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 MYL12BO14950 172 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 RAMP3O60896 148 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 GPX5O75715 221 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 ELANEP08246 267 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 IGFBP3P17936 291 aaPredicted RBP12.07□□□□□ -0.48
UBE3B-211ENST00000539843 SOX6P35712 828 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 DGCR2P98153 550 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 GPR50Q13585 617 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 RAB12Q6IQ22 244 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 ETV3LQ6ZN32 361 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 NKAIN3Q8N8D7 197 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 OR5M8Q8NGP6 311 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 UBALD1Q8TB05 177 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 PEX16Q9Y5Y5 336 aa12.07□□□□□ -0.48
UBE3B-211ENST00000539843 WI2-2373I1.2A0A1W2PRP0 233 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 EFCAB10A6NFE3 127 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 CCL24O00175 119 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 CRTAPO75718 401 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-211ENST00000539843 RGS11O94810 467 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 GLAP06280 429 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 CAPGP40121 348 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 FOXE3Q13461 319 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 STEAP3Q658P3 488 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 DMKNQ6E0U4 476 aaPredicted RBP12.06□□□□□ -0.48
UBE3B-211ENST00000539843 SLC25A48Q6ZT89 311 aaKnown RBP12.06□□□□□ -0.48
UBE3B-211ENST00000539843 OR13C5Q8NGS8 318 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 S1PR3Q99500 378 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 P2RX4Q99571 388 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 SELENOIQ9C0D9 397 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 CST11Q9H112 138 aa12.06□□□□□ -0.48
UBE3B-211ENST00000539843 RCC2Q9P258 522 aaKnown RBP12.06□□□□□ -0.48
UBE3B-211ENST00000539843 A0A1W2PP11 408 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 C12orf77C9JDV5 145 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 HBZP02008 142 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 MAS1P04201 325 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 MGMTP16455 207 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 FUT3P21217 361 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 DOC2BQ14184 412 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 ZNF554Q86TJ5 538 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 DHRSXQ8N5I4 330 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 Q8N6K4 173 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 PACRGLQ8N7B6 248 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 Q8N9W7 124 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 OR10V1Q8NGI7 309 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 ORAI1Q96D31 301 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 OR14A2Q96R54 314 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 B9D2Q9BPU9 175 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 CHCHD6Q9BRQ6 235 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 OR2S2Q9NQN1 319 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 ZNF581Q9P0T4 197 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 GHRLQ9UBU3 117 aa12.05□□□□□ -0.48
UBE3B-211ENST00000539843 PNMA8CA0A1B0GUJ8 204 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 H0YHG0 523 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 RPLP1P05386 114 aaKnown RBP12.04□□□□□ -0.48
UBE3B-211ENST00000539843 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-211ENST00000539843 ZNF137PP52743 207 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 MMDQ15546 238 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 LRRC36Q1X8D7 754 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 ZFP41Q8N8Y5 198 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 ST6GALNAC6Q969X2 333 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms