RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 BCL2L14Q9BZR8 327 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 STRADBQ9C0K7 418 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 SDF2L1Q9HCN8 221 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 GNG13Q9P2W3 67 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
UBE3B-209ENST00000539584 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 OR5H1A6NKK0 313 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 IFNA10P01566 189 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 TRGC2P03986 189 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 RAB11AP62491 216 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 DEFA6Q01524 100 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 LRRC75BQ2VPJ9 315 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 PKIBQ9C010 78 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 UBE2ZQ9H832 354 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-209ENST00000539584 RPRMQ9NS64 109 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 PITPNC1Q9UKF7 332 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 RFNGQ9Y644 331 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 SZT2Q5T011 3432 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 CABIN1Q9Y6J0 2220 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-209ENST00000539584 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 OR2T2Q6IF00 324 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 OR10V1Q8NGI7 309 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 RNASE11Q8TAA1 199 aaKnown RBP11.31□□□□□ -0.6
UBE3B-209ENST00000539584 CA5BP1Q8WTZ4 195 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
UBE3B-209ENST00000539584 BOKQ9UMX3 212 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-209ENST00000539584 URGCP-MRPS24S4R325 110 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 EML6Q6ZMW3 1958 aa11.31□□□□□ -0.6
UBE3B-209ENST00000539584 CD300LBA8K4G0 201 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 TRAPPC6AO75865 159 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 IGFBP4P22692 258 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 HOXA6P31267 233 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 GNG3P63215 75 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 WIPI1Q5MNZ9 446 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF525Q8N782 197 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 OR10D4PQ8NGN7 298 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 OR5P3Q8WZ94 311 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 PSENENQ9NZ42 101 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 TNRC6BQ9UPQ9 1833 aaKnown RBP11.3□□□□□ -0.6
UBE3B-209ENST00000539584 USP34Q70CQ2 3546 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 RNF212BA8MTL3 300 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 TRGC1P0CF51 173 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 CYB561P49447 251 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 ARF1P84077 181 aaKnown RBP11.3□□□□□ -0.6
UBE3B-209ENST00000539584 P4HA3Q7Z4N8 544 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 CENPVQ7Z7K6 275 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF383Q8NA42 475 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 FGF23Q9GZV9 251 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-209ENST00000539584 LRFN1Q9P244 771 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 PILRBQ9UKJ0 227 aa11.3□□□□□ -0.6
UBE3B-209ENST00000539584 C5orf49A4QMS7 147 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 MBP02144 154 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 PSG2P11465 335 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 GDF1P27539 372 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 PLP2Q04941 152 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 ATP6V1FQ16864 119 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 Q8IYB0 196 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 TDHQ8IZJ6 230 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 FAM58AQ8N1B3 248 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 OR5R1Q8NH85 324 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 WDR61Q9GZS3 305 aaKnown RBP11.29□□□□□ -0.6
UBE3B-209ENST00000539584 OR14J1Q9UGF5 321 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 NAT8Q9UHE5 227 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 ERRFI1Q9UJM3 462 aaPredicted RBP11.29□□□□□ -0.6
UBE3B-209ENST00000539584 MED12Q93074 2177 aa11.29□□□□□ -0.6
UBE3B-209ENST00000539584 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
UBE3B-209ENST00000539584 A0A0G2JMM0 328 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 A0A0G2JRQ6 117 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 A0A1W2PPB8 328 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 A0A1W2PRS3 328 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 ZFP92A6NM28 416 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 B4E171 279 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 TNFSF12O43508 249 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 SERPINA7P05543 415 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 TSPAN7P41732 249 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 PKIAP61925 76 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 ZBTB34Q8NCN2 500 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 SRD5A3Q9H8P0 318 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 CDH20Q9HBT6 801 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 RTTNQ86VV8 2226 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 CACNA1EQ15878 2313 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 TRAV24A0A0B4J272 114 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 TSTD3H0UI37 97 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 J3QW42 95 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 PHOX2AO14813 284 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 SOD3P08294 240 aa11.28□□□□□ -0.6
UBE3B-209ENST00000539584 SSTP61278 116 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms