RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 Q3ZCU0 254 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 C6orf183Q5T699 404 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 RAB12Q6IQ22 244 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 Q6ZPA2 131 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 MOB3BQ86TA1 216 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 IZUMO1Q8IYV9 350 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 WFDC9Q8NEX5 89 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 VCXQ9H320 206 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 BANF2Q9H503 90 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 RAB9BQ9NP90 201 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 TRAPPC2LQ9UL33 140 aa17.6■□□□□ 0.41
SCARB1-206ENST00000539320 FAM90A10PA6NDY2 464 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 FAM90A7PA6NKC0 464 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 FAM90A23PA8MXZ1 464 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 C12orf77C9JDV5 145 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 MGMTP16455 207 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 FAM53AQ6NSI3 398 aaPredicted RBP17.59■□□□□ 0.41
SCARB1-206ENST00000539320 LYPD6Q86Y78 171 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 SELENOIQ9C0D9 397 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 FKBP14Q9NWM8 211 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 ERGIC3Q9Y282 383 aa17.59■□□□□ 0.41
SCARB1-206ENST00000539320 IGHV3-72A0A0B4J1Y9 119 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 SPINT2O43291 252 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 CRTAPO75718 401 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-206ENST00000539320 IGLL1P15814 213 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 EBI3Q14213 229 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 SYT6Q5T7P8 510 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-206ENST00000539320 TRAT1Q6PIZ9 186 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 GAPTQ8N292 157 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 NANOGP1Q8N7R0 232 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 TMEM104Q8NE00 496 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 OR4K15Q8NH41 348 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 MRAPQ8TCY5 172 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 CHPT1Q8WUD6 406 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 Q96M66 194 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 UQCC2Q9BRT2 126 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 AURKAIP1Q9NWT8 199 aaPredicted RBP17.58■□□□□ 0.4
SCARB1-206ENST00000539320 GNG12Q9UBI6 72 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 PEX16Q9Y5Y5 336 aa17.58■□□□□ 0.4
SCARB1-206ENST00000539320 SERPINE3A8MV23 424 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 SLC31A2O15432 143 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 CA11O75493 328 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 SLC35A2P78381 396 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 FOXB2Q5VYV0 432 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 SLC35E3Q7Z769 313 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 ZNF329Q86UD4 541 aa17.57■□□□□ 0.4
SCARB1-206ENST00000539320 EAF1Q96JC9 268 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-206ENST00000539320 NOL4LQ96MY1 436 aaPredicted RBP17.57■□□□□ 0.4
SCARB1-206ENST00000539320 SC5DO75845 299 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 IGHG2P01859 326 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 HBZP02008 142 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 SLC25A48Q6ZT89 311 aaKnown RBP17.56■□□□□ 0.4
SCARB1-206ENST00000539320 Q8N6K4 173 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 ZNF439Q8NDP4 499 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 OR10V1Q8NGI7 309 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 OR2T10Q8NGZ9 312 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 OR1L1Q8NH94 360 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 RTN4IP1Q8WWV3 396 aaPredicted RBP17.56■□□□□ 0.4
SCARB1-206ENST00000539320 TFAP2CQ92754 450 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 ST6GALNAC6Q969X2 333 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 MND1Q9BWT6 205 aa17.56■□□□□ 0.4
SCARB1-206ENST00000539320 TXNL1O43396 289 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 PDCD6O75340 191 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 GLAP06280 429 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 CDK1P06493 297 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 FUT3P21217 361 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 ZNF137PP52743 207 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 RPL23AP62750 156 aaKnown RBP17.55■□□□□ 0.4
SCARB1-206ENST00000539320 GPR50Q13585 617 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 SIGIRRQ6IA17 410 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 TGIF2LXQ8IUE1 241 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 FOXRED2Q8IWF2 684 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 PRR18Q8N4B5 295 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 FAM46BQ96A09 425 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 RCC1LQ96I51 464 aaKnown RBP17.55■□□□□ 0.4
SCARB1-206ENST00000539320 CST11Q9H112 138 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 GHRLQ9UBU3 117 aa17.55■□□□□ 0.4
SCARB1-206ENST00000539320 NCBP2LA6PVI3 153 aaKnown RBP17.54■□□□□ 0.4
SCARB1-206ENST00000539320 CD1BP29016 333 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 VHLP40337 213 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 SLC35B1P78383 322 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 INSL4Q14641 139 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 RNLSQ5VYX0 342 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 OR51D1Q8NGF3 324 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 LIN7CQ9NUP9 197 aaKnown RBP17.54■□□□□ 0.4
SCARB1-206ENST00000539320 LINC00527Q9UJ94 153 aa17.54■□□□□ 0.4
SCARB1-206ENST00000539320 UBE2QL1A1L167 161 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 MPIG6BO95866 241 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 UBBP0CG47 229 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 RCC1P18754 421 aaPredicted RBP17.53■□□□□ 0.4
SCARB1-206ENST00000539320 ACSM3Q53FZ2 586 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 ETV3LQ6ZN32 361 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 OR2W3Q7Z3T1 314 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 STPG2Q8N412 459 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 MS4A15Q8N5U1 240 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 COMMD1Q8N668 190 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 LINC00482Q8N8I6 264 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 CYYR1Q96J86 154 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 TAF9BQ9HBM6 251 aa17.53■□□□□ 0.4
SCARB1-206ENST00000539320 MBNL3Q9NUK0 354 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms