RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TPBGQ13641 420 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 INSL4Q14641 139 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 LTC4SQ16873 150 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 FAM27D1Q5T7N8 215 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 LIPKQ5VXJ0 399 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 IZUMO2Q6UXV1 221 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 CEACAM19Q7Z692 300 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 C11orf44Q8N8P7 122 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 OR56B4Q8NH76 319 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 FAM110DQ8TAY7 271 aaPredicted RBP9.23□□□□□ -0.93
RTN3-209ENST00000538995 SGCDQ92629 289 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 LEAP2Q969E1 77 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 TRAPPC2LQ9UL33 140 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 BLOC1S6Q9UL45 172 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 MOB4Q9Y3A3 225 aa9.23□□□□□ -0.93
RTN3-209ENST00000538995 TET2Q6N021 2002 aaPredicted RBP9.22□□□□□ -0.93
RTN3-209ENST00000538995 C12orf77C9JDV5 145 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 HSD17B6O14756 317 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 SLC22A1O15245 554 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 IGHV3-7P01780 117 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 AMY1AP04745 511 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 AMY2AP04746 511 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 SNRNP70P08621 437 aaKnown RBP9.22□□□□□ -0.93
RTN3-209ENST00000538995 SRMP19623 302 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 EMX1Q04741 257 aaPredicted RBP9.22□□□□□ -0.93
RTN3-209ENST00000538995 TBCEQ15813 527 aaPredicted RBP9.22□□□□□ -0.93
RTN3-209ENST00000538995 TMEM95Q3KNT9 176 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 ABCA11PQ4W5N1 156 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 SYT6Q5T7P8 510 aaPredicted RBP9.22□□□□□ -0.93
RTN3-209ENST00000538995 SIGIRRQ6IA17 410 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 Q6ZS46 218 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 IZUMO1Q8IYV9 350 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 DRAM1Q8N682 238 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 OR6M1Q8NGM8 313 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 KCNG3Q8TAE7 436 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 CCDC107Q8WV48 283 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 FAM46BQ96A09 425 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 TMEM59Q9BXS4 323 aa9.22□□□□□ -0.93
RTN3-209ENST00000538995 MBNL3Q9NUK0 354 aaKnown RBP9.22□□□□□ -0.93
RTN3-209ENST00000538995 ERICH4A6NGS2 130 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 CCRL2O00421 344 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 FGF16O43320 207 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 TXNL1O43396 289 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 ARL6IP5O75915 188 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 BPNT1O95861 308 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 MPIG6BO95866 241 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 HBZP02008 142 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 GAPDHP04406 335 aaKnown RBP9.21□□□□□ -0.94
RTN3-209ENST00000538995 LPLP06858 475 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 HSMCR30P0CW71 290 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 VSIG8P0DPA2 414 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 CD28P10747 220 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 CPEP16870 476 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 HTR2CP28335 458 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 RANBP1P43487 201 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 ZNF137PP52743 207 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 RPS27AP62979 156 aaKnown RBP9.21□□□□□ -0.94
RTN3-209ENST00000538995 DEFA6Q01524 100 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 EBI3Q14213 229 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 FBLN7Q53RD9 439 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 STEAP3Q658P3 488 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 SLC25A48Q6ZT89 311 aaKnown RBP9.21□□□□□ -0.94
RTN3-209ENST00000538995 OR4F17Q8NGA8 305 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 OR4K15Q8NH41 348 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 NEDD4LQ96PU5 975 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 OR4F4Q96R69 305 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 TM2D1Q9BX74 207 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 GNG12Q9UBI6 72 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 RAB26Q9ULW5 256 aa9.21□□□□□ -0.94
RTN3-209ENST00000538995 IGHV1-3A0A0C4DH29 117 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 A0A1W2PPE3 182 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 TMEM14DPA8MWL7 114 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 KCNAB3O43448 404 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 TMEM11P17152 192 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 CHATP28329 748 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 CD83Q01151 205 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 DIAPH2-AS1Q14236 149 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 HES1Q14469 280 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 PDLIM3Q53GG5 364 aaPredicted RBP9.2□□□□□ -0.94
RTN3-209ENST00000538995 TMEM91Q6ZNR0 172 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 ZNF367Q7RTV3 350 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 OR2W3Q7Z3T1 314 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 C5orf56Q8N8D9 126 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 ZNF439Q8NDP4 499 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 OR5AU1Q8NGC0 362 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 MRPL30Q8TCC3 161 aaKnown RBP9.2□□□□□ -0.94
RTN3-209ENST00000538995 TMEM203Q969S6 136 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 ST6GALNAC6Q969X2 333 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 MGLLQ99685 303 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 CITED2Q99967 270 aaPredicted RBP9.2□□□□□ -0.94
RTN3-209ENST00000538995 CCDC90BQ9GZT6 254 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 TAF9BQ9HBM6 251 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 ACOT13Q9NPJ3 140 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 KCNIP1Q9NZI2 227 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 JPT1Q9UK76 154 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 LRRC42Q9Y546 428 aa9.2□□□□□ -0.94
RTN3-209ENST00000538995 IGHV3-43A0A0B4J1X8 118 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 UBE2QL1A1L167 161 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 ADARB2-AS1A8MUL3 147 aa9.19□□□□□ -0.94
RTN3-209ENST00000538995 SLC17A2O00624 439 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms