RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 FCN1O00602 326 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SLC16A7O60669 478 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 CEACAM3P40198 252 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 GFRA1P56159 465 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SMAGPQ0VAQ4 97 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PHLDA2Q53GA4 152 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 FHL5Q5TD97 284 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SYT13Q7L8C5 426 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF467Q7Z7K2 595 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ZAR1Q86SH2 424 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 CMTM8Q8IZV2 173 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 OR4N2Q8NGD1 307 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SLC25A40Q8TBP6 338 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 OR5P3Q8WZ94 311 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 SPSB1Q96BD6 273 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF479Q96JC4 524 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 POM121L2Q96KW2 1035 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 C1orf147Q96MC9 270 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 GPR27Q9NS67 375 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 THAP10Q9P2Z0 257 aaPredicted RBP7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 PILRBQ9UKJ0 227 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 INSL6Q9Y581 213 aa7.35□□□□□ -1.23
SRGAP1-202ENST00000537556 LOC102725191A0A1B0GVB3 256 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 MDFIC2A0A1B0GVS7 189 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 SOX1O00570 391 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF324O75467 553 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 TTRP02766 147 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 GLI4P10075 376 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 EN2P19622 333 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 PMCHP20382 165 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 CBLN1P23435 193 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 RHOBP62745 196 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 TSPO2Q5TGU0 170 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 WDR82Q6UXN9 313 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF695Q8IW36 515 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 OR4N5Q8IXE1 308 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 OR8I2Q8N0Y5 310 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 NINJ1Q92982 152 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 PLA2G3Q9NZ20 509 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 KLHL13Q9P2N7 655 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 PPP1R3CQ9UQK1 317 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 OR1A2Q9Y585 309 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 IGKV1D-42A0A075B6H8 117 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 NKX2-2O95096 273 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 ZNF823P16415 610 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 CD70P32970 193 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 HLA-BQ31612 363 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 RNFT1Q5M7Z0 435 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 OTPQ5XKR4 325 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 KIAA0895LQ68EN5 471 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 NEGR1Q7Z3B1 354 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 UBALD2Q8IYN6 164 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 SPACA9Q96E40 222 aaPredicted RBP7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 LRRC61Q9BV99 259 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 TM2D1Q9BX74 207 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 S1PR5Q9H228 398 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 VSIRQ9H7M9 311 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 NXT1Q9UKK6 140 aaKnown RBP7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 COL4A5P29400 1685 aa7.34□□□□□ -1.23
SRGAP1-202ENST00000537556 TRAV8-6A0A0B4J262 113 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 IGKV1-8A0A0C4DH67 115 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 PRSS37A4D1T9 235 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 CHST1O43916 411 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 SELPP16109 830 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 OR3A4PP47883 348 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 CEBPDP49716 269 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 FXYD4P59646 89 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 PLP1P60201 277 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ARF3P61204 181 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ARF1P84077 181 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ID3Q02535 119 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 POU3F1Q03052 451 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF90Q03938 601 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 RAB31Q13636 194 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 TCTEX1D4Q5JR98 221 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF776Q68DI1 518 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ATOH7Q8N100 152 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 OR2M3Q8NG83 312 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 KLHDC7BQ96G42 594 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 SFRP2Q96HF1 295 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 SPACA5Q96QH8 159 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 GTSF1LQ9H1H1 148 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 HCFC2Q9Y5Z7 792 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 MUC21A0A0G2JKD1 596 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 A0A1W2PP11 408 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 A0A1W2PS18 150 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 VSTM5A8MXK1 200 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 IGLL1P15814 213 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 RRADP55042 308 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 CXorf66Q5JRM2 361 aaPredicted RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 MUC21Q5SSG8 566 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 MRPL54Q6P161 138 aaKnown RBP7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 CBLN3Q6UW01 205 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ZNF547Q8IVP9 402 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 ODF3L1Q8IXM7 274 aa7.33□□□□□ -1.24
SRGAP1-202ENST00000537556 OR2A1Q8NGT9 310 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms