RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 GFI1Q99684 422 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 TM2D1Q9BX74 207 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 WNT10AQ9GZT5 417 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 RAB9BQ9NP90 201 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 ACOT13Q9NPJ3 140 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 GFOD1Q9NXC2 390 aa13.76□□□□□ -0.21
SFSWAP-205ENST00000537164 A0A1W2PPI3 338 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 C12orf77C9JDV5 145 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 DENRO43583 198 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 OR2F2O95006 317 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 BPNT1O95861 308 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 MPIG6BO95866 241 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 IGHV3-7P01780 117 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 CHATP28329 748 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 RAB7AP51149 207 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 FABP5Q01469 135 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 UNC119Q13432 240 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 HABP2Q14520 560 aaPredicted RBP13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 FBLN7Q53RD9 439 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 C6orf183Q5T699 404 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 Q6ZS46 218 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 Q6ZTK2 550 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 OR8H3Q8N146 312 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 TOMM40LQ969M1 308 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 OCSTAMPQ9BR26 566 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 TMEM59Q9BXS4 323 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 MMP27Q9H306 513 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 TRAPPC2LQ9UL33 140 aa13.75□□□□□ -0.21
SFSWAP-205ENST00000537164 SDCBPO00560 298 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 SLC17A2O00624 439 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 SPINT2O43291 252 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 RCC1P18754 421 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 CD24P25063 80 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 GNG10P50151 68 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 EMX1Q04741 257 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 ZNF816Q0VGE8 651 aaPredicted RBP13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 SSX1Q16384 188 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 LTC4SQ16873 150 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 OR10K2Q6IF99 312 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 CD200R1LQ6Q8B3 271 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 OR4K15Q8NH41 348 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 ST6GALNAC6Q969X2 333 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
SFSWAP-205ENST00000537164 M0QZK8 103 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 AMY1AP04745 511 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 AMY2AP04746 511 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 FAM106CPP0CH98 169 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 ZNF137PP52743 207 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 DIAPH2-AS1Q14236 149 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 C2orf68Q2NKX9 166 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 STEAP3Q658P3 488 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 OR2W3Q7Z3T1 314 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 FAM89BQ8N5H3 189 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 ZNF439Q8NDP4 499 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 OR10X1Q8NGY0 326 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 MRPL30Q8TCC3 161 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 CYYR1Q96J86 154 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 YTHDF1Q9BYJ9 559 aaKnown RBP13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 NDUFB11Q9NX14 153 aa13.73□□□□□ -0.21
SFSWAP-205ENST00000537164 UBE2QL1A1L167 161 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 HBZP02008 142 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 GALP22466 123 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 RANBP1P43487 201 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 PSMD7P51665 324 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 EBI3Q14213 229 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 SLC25A48Q6ZT89 311 aaKnown RBP13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 UBALD1Q8TB05 177 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 NEDD4LQ96PU5 975 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 SULT4A1Q9BR01 284 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 LPAR5Q9H1C0 372 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 Q9H521 79 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 TAF9BQ9HBM6 251 aa13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 AK6Q9Y3D8 172 aaKnown RBP13.72□□□□□ -0.21
SFSWAP-205ENST00000537164 A0A0A6YYD4 124 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 TRAV1-2A0A0B4J238 106 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 A0A1W2PPE3 182 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 HSD17B6O14756 317 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 NAPSAO96009 420 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 GAPDHP04406 335 aaKnown RBP13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 VSIG10L2P0DP72 767 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 ARSBP15848 533 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 HTD2P86397 168 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 LY6G6FQ5SQ64 297 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 UBE2UQ5VVX9 321 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 FAM53AQ6NSI3 398 aaPredicted RBP13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 DRAM1Q8N682 238 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 OR56B4Q8NH76 319 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 NICN1Q9BSH3 213 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 KCNK15Q9H427 330 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 PLGRKTQ9HBL7 147 aa13.71□□□□□ -0.21
SFSWAP-205ENST00000537164 IGHV3-43A0A0B4J1X8 118 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 IGHV1-3A0A0C4DH29 117 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 FOXI3A8MTJ6 420 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 CCRL2O00421 344 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 TSPAN15O95858 294 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 SNRNP70P08621 437 aaKnown RBP13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 IGHV3-43DP0DP04 118 aa13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 VDAC2P45880 294 aaPredicted RBP13.7□□□□□ -0.22
SFSWAP-205ENST00000537164 ZNF134P52741 427 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms