RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CKLFQ9UBR5 152 aa5.65□□□□□ -1.5
YBX3-206ENST00000536823 NKX1-2Q9UD57 310 aaPredicted RBP5.65□□□□□ -1.5
YBX3-206ENST00000536823 KIF25Q9UIL4 384 aa5.65□□□□□ -1.5
YBX3-206ENST00000536823 PITPNC1Q9UKF7 332 aa5.65□□□□□ -1.5
YBX3-206ENST00000536823 SIGLEC9Q9Y336 463 aa5.65□□□□□ -1.5
YBX3-206ENST00000536823 HILPDAQ9Y5L2 63 aa5.65□□□□□ -1.5
YBX3-206ENST00000536823 DNAH3Q8TD57 4116 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 MEIKINA0A087WXM9 373 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 KBTBD11-OT1A0A1B0GTJ5 212 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 FAM172BPA6NC97 362 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 FAM90A22PA8MWA6 464 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 OR7C1O76099 320 aaPredicted RBP5.64□□□□□ -1.51
YBX3-206ENST00000536823 CDRT1O95170 752 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 IL1AP01583 271 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 IGLV1-47P01700 117 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 CGB3P0DN86 165 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 CGB7P0DN87 165 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 C21orf33P30042 268 aaPredicted RBP5.64□□□□□ -1.51
YBX3-206ENST00000536823 AQP4P55087 323 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 SLC34A1Q06495 639 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 C17orf58Q2M2W7 97 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 MPV17LQ2QL34 196 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 HLA-DRB5Q30154 266 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 RSBN1Q5VWQ0 802 aaPredicted RBP5.64□□□□□ -1.51
YBX3-206ENST00000536823 CCBE1Q6UXH8 406 aaPredicted RBP5.64□□□□□ -1.51
YBX3-206ENST00000536823 Q6ZPA2 131 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 LINC00596Q86U02 117 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 RTN4RL2Q86UN3 420 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 TMEM219Q86XT9 240 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 Q8N2B8 174 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 OSR2Q8N2R0 312 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 KLHDC1Q8N7A1 406 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 OR4D6Q8NGJ1 314 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 OR13A1Q8NGR1 328 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 OR2T6Q8NHC8 308 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 PLPPR1Q8TBJ4 325 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 THRSPQ92748 146 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 DERL3Q96Q80 235 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 MMP27Q9H306 513 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 LINC00574Q9H8X3 128 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 ZNF286AQ9HBT8 521 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 PCDHB16Q9NRJ7 776 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 CALYQ9NYX4 217 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 ZNF581Q9P0T4 197 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 DPM3Q9P2X0 92 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 ST3GAL6Q9Y274 331 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 ERGIC3Q9Y282 383 aa5.64□□□□□ -1.51
YBX3-206ENST00000536823 A0A087X0M5 115 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 A0A1B0GX30 115 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 GEMIN2O14893 280 aaKnown RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 ZNF780AO75290 641 aaPredicted RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 CSTBP04080 98 aaKnown RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 CDK1P06493 297 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 CELP19835 753 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 SERPINA2P20848 420 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 NFYBP25208 207 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 MAPK3P27361 379 aaPredicted RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 CEACAM3P40198 252 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 RAB13P51153 203 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 ARHGDIBP52566 201 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 GABPB1Q06547 395 aaPredicted RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 HERPUD1Q15011 391 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 C2orf68Q2NKX9 166 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 SLC22A6Q4U2R8 563 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 C6orf141Q5SZD1 244 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 TPTE2P1Q5T6R2 138 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 RNLSQ5VYX0 342 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 C16orf82Q7Z2V1 217 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 CDH26Q8IXH8 852 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 JAGN1Q8N5M9 183 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 NANOGP1Q8N7R0 232 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 SUMF2Q8NBJ7 301 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 MUL1Q969V5 352 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 CREB3L1Q96BA8 519 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 S100A13Q99584 98 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 DPCDQ9BVM2 203 aaPredicted RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 C1orf43Q9BWL3 253 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 MND1Q9BWT6 205 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 BARHL1Q9BZE3 327 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 PRSS22Q9GZN4 317 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 IDI2-AS1Q9NZ38 188 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 RCC2Q9P258 522 aaKnown RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 ING4Q9UNL4 249 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 FOXJ3Q9UPW0 622 aa5.63□□□□□ -1.51
YBX3-206ENST00000536823 MRPS28Q9Y2Q9 187 aaKnown RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 LSM2Q9Y333 95 aaKnown RBP5.63□□□□□ -1.51
YBX3-206ENST00000536823 A0A1W2PP11 408 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 A0A1W2PPK0 400 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 TMEM30CPA0ZSE6 113 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 LEUTXA8MZ59 168 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 OOSP1A8MZH6 123 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 NPIPB11E5RHQ5 1161 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 LY6LH3BQJ8 138 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 BUB1B-PAK6H3BSN5 160 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 TOR1AO14656 332 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 PIN1P1O15428 100 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 GTF2F2P13984 249 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 BRS3P32247 399 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 SSTR5P35346 364 aa5.62□□□□□ -1.51
YBX3-206ENST00000536823 PRRX1P54821 245 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms