RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 VGLL3A8MV65 326 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 MCRIP1C9JLW8 97 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PDCD6O75340 191 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 BLVRBP30043 206 aaPredicted RBP14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 VEGFCP49767 419 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 EFNB2P52799 333 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PLA2G7Q13093 441 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 DYNC1I2Q13409 638 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RBM39Q14498 530 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 NKAPLQ5M9Q1 402 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 DYNC2LI1Q8TCX1 351 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CORO2AQ92828 525 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 DGCR14Q96DF8 476 aaKnown RBP14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ATG5Q9H1Y0 275 aa14.44□□□□□ -0.1
TNFRSF1A-209ENST00000536717 A0A0A6YYD4 124 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ODAMA1E959 279 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ATXN7L3Q14CW9 347 aaPredicted RBP14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SIGIRRQ6IA17 410 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SLC35E4Q6ICL7 350 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 BRICD5Q6PL45 260 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 BAIAP2L2Q6UXY1 529 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 OR5H6Q8NGV6 325 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 MALSU1Q96EH3 234 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TMEM133Q9H2Q1 129 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RHBDL2Q9NX52 303 aa14.43□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TRGV10A0A0A0MS01 117 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SCGNO76038 276 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 GLAP06280 429 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 GDNFP39905 211 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SSX2Q16385 188 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PLA1AQ53H76 456 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 KRBOX4Q5JUW0 171 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 MZT2AQ6P582 158 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 HEPN1Q6WQI6 88 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PHF21AQ96BD5 680 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PLEKHJ1Q9NW61 149 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ING3Q9NXR8 418 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TAS2R3Q9NYW6 316 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CCDC59Q9P031 241 aaKnown RBP14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 COMMD3Q9UBI1 195 aa14.42□□□□□ -0.1
TNFRSF1A-209ENST00000536717 A6NHS1 94 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SOCS1O15524 211 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CHST1O43916 411 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CDK2P24941 298 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CHATP28329 748 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RAB13P51153 203 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PRAMEF5Q5TYX0 476 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 Q6ZTK2 550 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SAMD12Q8N8I0 201 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CLEC7AQ9BXN2 247 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 GAL3ST2Q9H3Q3 398 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TET2Q6N021 2002 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 UBE2NLQ5JXB2 153 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 MINOS1Q5TGZ0 78 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 C6orf201Q7Z4U5 140 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 OR4P4Q8NGL7 312 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 OR10R2Q8NGX6 335 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 SLC25A38Q96DW6 304 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RAB3CQ96E17 227 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ETAA1Q9NY74 926 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 HSF4Q9ULV5 492 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 MINOS1-NBL1R4GNA1 71 aa14.41□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RAB27BO00194 218 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CA11O75493 328 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 PAX5Q02548 391 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 C17orf58Q2M2W7 97 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CCBE1Q6UXH8 406 aaPredicted RBP14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 ARHGAP5-AS1Q96IT6 56 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 CMTM3Q96MX0 182 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 DCUN1D5Q9BTE7 237 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 RAB18Q9NP72 206 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TCF19Q9Y242 345 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 HILPDAQ9Y5L2 63 aa14.4□□□□□ -0.1
TNFRSF1A-209ENST00000536717 TMEM30CPA0ZSE6 113 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 UBE2QL1A1L167 161 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FAM172BPA6NC97 362 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FOXI3A8MTJ6 420 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CGB3P0DN86 165 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 CGB7P0DN87 165 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 KIR2DS4P43632 304 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 TMEM50BP56557 158 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ARL6IP1Q15041 203 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MOGAT2Q3SYC2 334 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 RSBN1Q5VWQ0 802 aaPredicted RBP14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 OR52W1Q6IF63 320 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 LIAT1Q6ZQX7 453 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ABHD12Q8N2K0 398 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 PLPPR1Q8TBJ4 325 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 S100A16Q96FQ6 103 aaKnown RBP14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 SULT4A1Q9BR01 284 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 FAAP24Q9BTP7 215 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ABCG5Q9H222 651 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 DIABLOQ9NR28 239 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 OR6C3Q9NZP0 311 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 SIGLEC9Q9Y336 463 aa14.39□□□□□ -0.11
TNFRSF1A-209ENST00000536717 MEIKINA0A087WXM9 373 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 A0A0A6YYH2 397 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 A6NJ64 397 aa14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 ZNF729A6NN14 1252 aaPredicted RBP14.38□□□□□ -0.11
TNFRSF1A-209ENST00000536717 IGLV1-47P01700 117 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms