RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RAB11BQ15907 218 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 CD200R1LQ6Q8B3 271 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 Q6ZPA2 131 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 C6orf201Q7Z4U5 140 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 OR10A7Q8NGE5 316 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 OR4C13Q8NGP0 309 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 FAAP24Q9BTP7 215 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 NPFFR1Q9GZQ6 430 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 LPAR5Q9H1C0 372 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 PLGRKTQ9HBL7 147 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 GFOD1Q9NXC2 390 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 FBLN5Q9UBX5 448 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 TRAPPC2LQ9UL33 140 aa10.55□□□□□ -0.72
PRKDC-206ENST00000536429 A0A1W2PPI3 338 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 SOCS1O15524 211 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 ORC5O43913 435 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 HBZP02008 142 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 GLAP06280 429 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 ARSBP15848 533 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 TMEM95Q3KNT9 176 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 PRR31Q5SQ13 230 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 HES5Q5TA89 166 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 C22orf42Q6IC83 251 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 ZNF773Q6PK81 442 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 PRR18Q8N4B5 295 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 SVOPQ8N4V2 548 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 OR51D1Q8NGF3 324 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 OR10V1Q8NGI7 309 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 RPEQ96AT9 228 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 RBMXL1Q96E39 390 aaKnown RBP10.54□□□□□ -0.72
PRKDC-206ENST00000536429 YTHDF1Q9BYJ9 559 aaKnown RBP10.54□□□□□ -0.72
PRKDC-206ENST00000536429 RANBP3Q9H6Z4 567 aaPredicted RBP10.54□□□□□ -0.72
PRKDC-206ENST00000536429 LRRC42Q9Y546 428 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 WNK1Q9H4A3 2382 aa10.54□□□□□ -0.72
PRKDC-206ENST00000536429 A0A0B4J203 849 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 TRDV1A0A1B0GX56 115 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 SMIM30A4D0T7 59 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 SH2D7A6NKC9 451 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-206ENST00000536429 FOXI3A8MTJ6 420 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-206ENST00000536429 CCRL2O00421 344 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 TIMM23O14925 209 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 LDLRAD4O15165 306 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 BLVRBP30043 206 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-206ENST00000536429 REG1BP48304 166 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 GNMTQ14749 295 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 SLC16A12Q6ZSM3 486 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 NR2C2APQ86WQ0 139 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 Q8N2B8 174 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 DRAM1Q8N682 238 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 OR52M1Q8NGK5 317 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 OR10X1Q8NGY0 326 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 OR56B4Q8NH76 319 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 TOMM40LQ969M1 308 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 CREB3L1Q96BA8 519 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 FAM3DQ96BQ1 224 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 NEDD4LQ96PU5 975 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 HDHD3Q9BSH5 251 aaPredicted RBP10.53□□□□□ -0.72
PRKDC-206ENST00000536429 ZNF696Q9H7X3 374 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 TAF9BQ9HBM6 251 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 SERTAD4Q9NUC0 356 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 MBNL3Q9NUK0 354 aaKnown RBP10.53□□□□□ -0.72
PRKDC-206ENST00000536429 PITPNC1Q9UKF7 332 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 V9GY05 133 aa10.53□□□□□ -0.72
PRKDC-206ENST00000536429 TRAV1-2A0A0B4J238 106 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 CA11O75493 328 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 BRS3P32247 399 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 CEACAM3P40198 252 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 ZNF134P52741 427 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 TMEM50BP56557 158 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 MADCAM1Q13477 382 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 C2orf76Q3KRA6 126 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 C6orf183Q5T699 404 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 OR2W3Q7Z3T1 314 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 KLHDC1Q8N7A1 406 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 ZNF439Q8NDP4 499 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 OR52L2PQ8NGH6 319 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 OR2T6Q8NHC8 308 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 CAPSLQ8WWF8 208 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 CFHR4Q92496 578 aa10.52□□□□□ -0.73
PRKDC-206ENST00000536429 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
PRKDC-206ENST00000536429 IGHV3-72A0A0B4J1Y9 119 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 FAM90A9PA6NNJ1 464 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 OOSP1A8MZH6 123 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 SPINT2O43291 252 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 AMY1AP04745 511 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 AMY2AP04746 511 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 SNRNP70P08621 437 aaKnown RBP10.51□□□□□ -0.73
PRKDC-206ENST00000536429 VSIG10L2P0DP72 767 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 MNDAP41218 407 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 VEGFCP49767 419 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 CT45A1Q5HYN5 189 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 CCDC144NLQ6NUI1 221 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 FAM89BQ8N5H3 189 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 LINC00311Q8N616 119 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 CT45A3Q8NHU0 189 aa10.51□□□□□ -0.73
PRKDC-206ENST00000536429 FCGR1BQ92637 280 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms