RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 TSSK6Q9BXA6 273 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 DUSP16Q9BY84 665 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 RTN4RQ9BZR6 473 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NMES1Q9C002 83 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 EIF5A2Q9GZV4 153 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 FZD8Q9H461 694 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TUBB1Q9H4B7 451 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 BANF2Q9H503 90 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TAF9BQ9HBM6 251 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 ZNF160Q9HCG1 818 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 APMAPQ9HDC9 416 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 A4GALTQ9NPC4 353 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 INPP5EQ9NRR6 644 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TMEM106BQ9NUM4 274 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 MRPL16Q9NX20 251 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 DNAJC27Q9NZQ0 273 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 MRPL15Q9P015 296 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 ZNF319Q9P2F9 582 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 MRM2Q9UI43 246 aaKnown RBP2.09□□□□□ -2.07
SKA3-207ENST00000536239 PILRBQ9UKJ0 227 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 FBXW2Q9UKT8 454 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 TRAPPC2LQ9UL33 140 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 MMP17Q9ULZ9 603 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 HHLA2Q9UM44 414 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SCML2Q9UQR0 700 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SLC17A4Q9Y2C5 497 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 UFC1Q9Y3C8 167 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 PYGO1Q9Y3Y4 419 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 RNF115Q9Y4L5 304 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NEUROG3Q9Y4Z2 214 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 NINQ8N4C6 2090 aa2.09□□□□□ -2.07
SKA3-207ENST00000536239 SBF2Q86WG5 1849 aa2.09□□□□□ -2.08
SKA3-207ENST00000536239 NRXN3Q9Y4C0 1643 aa2.09□□□□□ -2.08
SKA3-207ENST00000536239 TICRRQ7Z2Z1 1910 aa2.09□□□□□ -2.08
SKA3-207ENST00000536239 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 MYO10Q9HD67 2058 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 IGHV2-26A0A0B4J1V2 119 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TRAV38-1A0A0B4J264 116 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 A0A0G2JMM0 328 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 A0A1W2PPB8 328 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TMEM189A5PLL7 270 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TMEM150BA6NC51 233 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 MAP1LC3B2A6NCE7 125 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ZNF860A6NHJ4 632 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ZNF727A8MUV8 499 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 HEPACAM2A8MVW5 462 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 KIR3DP1A8MWS1 328 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 C9JVG2 144 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 H0Y980 276 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 H7BYZ3 331 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 GAPDHSO14556 408 aaPredicted RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 HSD17B6O14756 317 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 GEMIN2O14893 280 aaKnown RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 P2RX6O15547 441 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 LATO43561 262 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 SNAI2O43623 268 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ZNF207O43670 478 aaKnown RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 CD5LO43866 347 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 OR1I1O60431 355 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ZNF354AO60765 605 aaPredicted RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 LRP3O75074 770 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ARL6IP5O75915 188 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 RCBTB2O95199 551 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CNIH1O95406 144 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TMEM50AO95807 157 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 HAND1O96004 215 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 HBZP02008 142 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TYMSP04818 313 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 SERPINA7P05543 415 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CTSLP07711 333 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 SEC11BP0C7V7 166 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 AKAIN1P0CW23 69 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 IGLC2P0DOY2 106 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 IGLC3P0DOY3 106 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ERGP11308 486 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CD99P14209 185 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 AREGP15514 252 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 EPORP19235 508 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CELP19835 753 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TCN2P20062 427 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 SAT1P21673 171 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 PPIBP23284 216 aaKnown RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 ATP6V0CP27449 155 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CD34P28906 385 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 SOAT1P35610 550 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CTRLP40313 264 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 MDH2P40926 338 aaKnown RBP2.08□□□□□ -2.08
SKA3-207ENST00000536239 ID1P41134 155 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 PPICP45877 212 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CX3CR1P49238 355 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 PRLHRP49683 370 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 GNG4P50150 75 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 GPM6AP51674 278 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ATP1B3P54709 279 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 ATP5J2P56134 94 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 CLDN15P56746 228 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TPPP2P59282 170 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 TAS2R30P59541 319 aa2.08□□□□□ -2.08
SKA3-207ENST00000536239 RPL32P62910 135 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms