RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 PKIBQ9C010 78 aa11.2□□□□□ -0.62
LDLR-203ENST00000535915 OR51I2Q9H344 312 aa11.2□□□□□ -0.62
LDLR-203ENST00000535915 RPS10P5Q9NQ39 176 aa11.2□□□□□ -0.62
LDLR-203ENST00000535915 SMCO4Q9NRQ5 59 aa11.2□□□□□ -0.62
LDLR-203ENST00000535915 SPRR3Q9UBC9 169 aa11.2□□□□□ -0.62
LDLR-203ENST00000535915 ERRFI1Q9UJM3 462 aaPredicted RBP11.2□□□□□ -0.62
LDLR-203ENST00000535915 LOC400499M0QZD8 3231 aa11.2□□□□□ -0.62
LDLR-203ENST00000535915 CLEC18AA5D8T8 446 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 ARGFXA6NJG6 315 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 FBP1P09467 338 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 F2RP25116 425 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 ATP6V0CP27449 155 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 ARG2P78540 354 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 TBC1D28Q2M2D7 210 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 ZNF324BQ6AW86 544 aaPredicted RBP11.19□□□□□ -0.62
LDLR-203ENST00000535915 TMEM217Q8N7C4 229 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 CLEC18CQ8NCF0 446 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 OR51H1Q8NH63 302 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 TMEM171Q8WVE6 324 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 PBDC1Q9BVG4 233 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 FBXO7Q9Y3I1 522 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 TRBV6-6A0A0A6YYG2 114 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 K7N7A8 449 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 EPHA1P21709 976 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
LDLR-203ENST00000535915 DYNLT3P51808 116 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 ID3Q02535 119 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
LDLR-203ENST00000535915 SEBOXQ9HB31 216 aaPredicted RBP11.19□□□□□ -0.62
LDLR-203ENST00000535915 A0A1W2PR80 420 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 J3QT63 122 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 CHST1O43916 411 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 SNRNP70P08621 437 aaKnown RBP11.18□□□□□ -0.62
LDLR-203ENST00000535915 ZNF124Q15973 351 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 ZNF766Q5HY98 468 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 C9orf152Q5JTZ5 239 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 ZNF880Q6PDB4 577 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 H1FOOQ8IZA3 346 aaPredicted RBP11.18□□□□□ -0.62
LDLR-203ENST00000535915 PLPPR1Q8TBJ4 325 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 IL22RA2Q969J5 263 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 LOXL4Q96JB6 756 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 RTL8AQ9BWD3 113 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 DIDO1Q9BTC0 2240 aaKnown RBP11.18□□□□□ -0.62
LDLR-203ENST00000535915 TRAV39A0A0B4J263 110 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 COLCA2A8K830 154 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 M0R036 132 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 HSPA12AO43301 675 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 TMEM50AO95807 157 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 SERPINE2P07093 398 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 AWAT1Q58HT5 328 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 MYPOPQ86VE0 399 aaPredicted RBP11.18□□□□□ -0.62
LDLR-203ENST00000535915 LFNGQ8NES3 379 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 C14orf79Q96F83 325 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 CLCC1Q96S66 551 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 GP6Q9HCN6 339 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 OR1A1Q9P1Q5 309 aa11.18□□□□□ -0.62
LDLR-203ENST00000535915 ZNF729A6NN14 1252 aaPredicted RBP11.17□□□□□ -0.62
LDLR-203ENST00000535915 SIRPB1O00241 398 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 GPR37O15354 613 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 CELA3BP08861 270 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 DEFA6Q01524 100 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 TMPRSS7Q7RTY8 843 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 P4HA3Q7Z4N8 544 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 STX12Q86Y82 276 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 RNASE11Q8TAA1 199 aaKnown RBP11.17□□□□□ -0.62
LDLR-203ENST00000535915 C20orf24Q9BUV8 137 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 TAAR3PQ9P1P4 343 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 CDRT15L2A8MXV6 281 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 UMAD1C9J7I0 102 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 RNF224P0DH78 156 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 PSG2P11465 335 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 MMP9P14780 707 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 LMO1P25800 156 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 OR2B11Q5JQS5 317 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 Q6P435 159 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 ODF3L1Q8IXM7 274 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 OR10V1Q8NGI7 309 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 CABLES2Q9BTV7 478 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 ABHD14AQ9BUJ0 271 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 OR2J1Q9GZK6 312 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 KCNJ16Q9NPI9 418 aa11.17□□□□□ -0.62
LDLR-203ENST00000535915 A0A0G2JRQ6 117 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 IGHV3-64DA0A0J9YX35 117 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 ZNF14P17017 642 aaPredicted RBP11.16□□□□□ -0.62
LDLR-203ENST00000535915 IDH3GP51553 393 aaPredicted RBP11.16□□□□□ -0.62
LDLR-203ENST00000535915 PPP1CBP62140 327 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 BAXQ07812 192 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 GTF3C1Q12789 2109 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 ZNF154Q13106 437 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 MRPL49Q13405 166 aaKnown RBP11.16□□□□□ -0.62
LDLR-203ENST00000535915 WDR86Q86TI4 376 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 C15orf54Q8N8G6 183 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 SCCPDHQ8NBX0 429 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 CD300LFQ8TDQ1 290 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
LDLR-203ENST00000535915 RBM7Q9Y580 266 aaKnown RBP11.16□□□□□ -0.62
LDLR-203ENST00000535915 C7orf77A4D0Y5 90 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms