RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 DCSTAMPQ9H295 470 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 TMEM133Q9H2Q1 129 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 PCDHB16Q9NRJ7 776 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 RHBDL2Q9NX52 303 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 OR6C3Q9NZP0 311 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 HSF4Q9ULV5 492 aa10.61□□□□□ -0.71
CHFR-210ENST00000535527 A0A087X0M5 115 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 IGKV1-6A0A0C4DH72 117 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 A0A1B0GX30 115 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 TMEM89A2RUT3 159 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 H3BMQ9 156 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 SSX5O60225 188 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 IGLV1-47P01700 117 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 GLAP06280 429 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 EIF4EP06730 217 aaKnown RBP10.6□□□□□ -0.71
CHFR-210ENST00000535527 MELTFP08582 738 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 HIST1H1DP16402 221 aaKnown RBP10.6□□□□□ -0.71
CHFR-210ENST00000535527 CD34P28906 385 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 HMGN3Q15651 99 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 NCR3LG1Q68D85 454 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 IZUMO1Q8IYV9 350 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 ZNF439Q8NDP4 499 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 GCDHQ92947 438 aaPredicted RBP10.6□□□□□ -0.71
CHFR-210ENST00000535527 PTX4Q96A99 478 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 NEDD4LQ96PU5 975 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 URM1Q9BTM9 101 aaKnown RBP10.6□□□□□ -0.71
CHFR-210ENST00000535527 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 IDI2-AS1Q9NZ38 188 aa10.6□□□□□ -0.71
CHFR-210ENST00000535527 A0A075B6Q4 140 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 F2RL2O00254 374 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 IGHV4-59P01825 116 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 HBZP02008 142 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 ACTG1P63261 375 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 SCGB2A2Q13296 93 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 ZNF260Q3ZCT1 412 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 PRR31Q5SQ13 230 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 FOXB2Q5VYV0 432 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 Q6ZTK2 550 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 OR56B1Q8NGI3 324 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 PIFOQ8TCI5 191 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 NUDCD2Q8WVJ2 157 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 ARL11Q969Q4 196 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 ISOC1Q96CN7 298 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 ATG5Q9H1Y0 275 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 GAL3ST2Q9H3Q3 398 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 TAF9BQ9HBM6 251 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 PLEKHJ1Q9NW61 149 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
CHFR-210ENST00000535527 SPATA2Q9UM82 520 aa10.59□□□□□ -0.71
CHFR-210ENST00000535527 TRBV6-6A0A0A6YYG2 114 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 FUOMA2VDF0 154 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 TMEM235A6NFC5 223 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 LY6LH3BQJ8 138 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 HOXA3O43365 443 aaPredicted RBP10.58□□□□□ -0.72
CHFR-210ENST00000535527 ORC5O43913 435 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 ARG1P05089 322 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 NFYBP25208 207 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 GNG10P50151 68 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 ZNF134P52741 427 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 MADCAM1Q13477 382 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 RBM39Q14498 530 aaKnown RBP10.58□□□□□ -0.72
CHFR-210ENST00000535527 SLC9A3R2Q15599 337 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 PLA1AQ53H76 456 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 Q6YL49 198 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 LDLRAD3Q86YD5 345 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 OR52L2PQ8NGH6 319 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 OR10V1Q8NGI7 309 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 DYNC2LI1Q8TCX1 351 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 FAM216AQ8WUB2 273 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 RAB3CQ96E17 227 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 CLEC7AQ9BXN2 247 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 MIXL1Q9H2W2 232 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 Q9N2K0 584 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.58□□□□□ -0.72
CHFR-210ENST00000535527 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 OR1A1Q9P1Q5 309 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 TRAPPC2LQ9UL33 140 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 PAIP2BQ9ULR5 123 aaKnown RBP10.58□□□□□ -0.72
CHFR-210ENST00000535527 PSG11Q9UQ72 335 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 ETV7Q9Y603 341 aa10.58□□□□□ -0.72
CHFR-210ENST00000535527 TRRAPQ9Y4A5 3859 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 A0A1W2PPH5 198 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 FCGR3AP08637 254 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 SCTP09683 121 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 CD3GP09693 182 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 FPR2P25090 351 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 UBA52P62987 128 aaKnown RBP10.57□□□□□ -0.72
CHFR-210ENST00000535527 HLA-DRB3P79483 266 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 GUCA2AQ02747 115 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 HLA-DRB5Q30154 266 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 MIDNQ504T8 468 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 USP43Q70EL4 1123 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 ZNF554Q86TJ5 538 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 ABHD12Q8N2K0 398 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 PRR18Q8N4B5 295 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 CHIAQ9BZP6 476 aa10.57□□□□□ -0.72
CHFR-210ENST00000535527 HEXA-AS1Q9H8Q6 139 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms