RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TMEM211Q6ICI0 200 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 HCP5Q6MZN7 132 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 NUP37Q8NFH4 326 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 SEC11CQ9BY50 192 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 OPN3Q9H1Y3 402 aaPredicted RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 TBL2Q9Y4P3 447 aaKnown RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 ARID1AO14497 2285 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ICE1Q9Y2F5 2266 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ATG4DQ86TL0 474 aaPredicted RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 Q8WTZ3 238 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 WDR34Q96EX3 536 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 NEIL1Q96FI4 390 aaPredicted RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 TP53RKQ96S44 253 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 GPHA2Q96T91 129 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 NHSL1Q5SYE7 1610 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 SMPD2O60906 423 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 KIR2DL1P43626 348 aaPredicted RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 ZDHHC22Q8N966 263 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 OR6X1Q8NH79 312 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ZCCHC14Q8WYQ9 949 aaKnown RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 NPAS1Q99742 590 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ADRA2AP08913 450 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 MDH2P40926 338 aaKnown RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 NUBP1P53384 320 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 CCL8P80075 99 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ELOBQ15370 118 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 TMEM255AQ5JRV8 349 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ZBTB37Q5TC79 503 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 OR2H1Q9GZK4 316 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 MFSD2BA6NFX1 497 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 PSG2P11465 335 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 EMP1P54849 157 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 SSBP1Q04837 148 aaKnown RBP11.05□□□□□ -0.64
SPG11-203ENST00000535302 MMDQ15546 238 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 GAB4Q2WGN9 574 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 SPICQ8N5J4 248 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 ZDHHC8Q9ULC8 765 aa11.05□□□□□ -0.64
SPG11-203ENST00000535302 RAC3P60763 192 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 PAFAH1B2P68402 229 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 OR10G8Q8NGN5 311 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 OIT3Q8WWZ8 545 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 GPR35Q9HC97 309 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 MPC2O95563 127 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 COL5A1-AS1Q5SY13 56 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 CLDN34H7C241 214 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 KIR2DL2P43627 348 aaPredicted RBP11.04□□□□□ -0.64
SPG11-203ENST00000535302 COL10A1Q03692 680 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 MDP1Q86V88 176 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 ZNF738Q8NE65 137 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 FAM131CQ96AQ9 280 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 SNRNP40Q96DI7 357 aaKnown RBP11.04□□□□□ -0.64
SPG11-203ENST00000535302 HOXC4P09017 264 aaPredicted RBP11.04□□□□□ -0.64
SPG11-203ENST00000535302 BRS3P32247 399 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 CLEC18BQ6UXF7 455 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 GBGT1Q8N5D6 347 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 ZNF385AQ96PM9 386 aaKnown RBP11.04□□□□□ -0.64
SPG11-203ENST00000535302 PCMT1P22061 227 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 CACNG7P62955 275 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 SLC25A53Q5H9E4 307 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 RFLNBQ8N5W9 214 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 WFIKKN1Q96NZ8 548 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 IFITM10A6NMD0 228 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 PRF1P14222 555 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 ZP3P21754 424 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 TM4SF20Q53R12 229 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 AWAT1Q58HT5 328 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 OR4S2Q8NH73 311 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 RAB40CQ96S21 281 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 NTMQ9P121 344 aa11.04□□□□□ -0.64
SPG11-203ENST00000535302 CORTO00230 105 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 KLF7O75840 302 aaPredicted RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 TGFAP01135 160 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 PRB4P10163 310 aaPredicted RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 KIR2DS2P43631 304 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 OR13C6PQ8NH95 151 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 NEU1Q99519 415 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 NEURL2Q9BR09 285 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 STARD10Q9Y365 291 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 KIAA0100Q14667 2235 aaKnown RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 PPP1R17O96001 155 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 RCC1P18754 421 aaPredicted RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 PPP1CCP36873 323 aaKnown RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 ZNF770Q6IQ21 691 aaPredicted RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 JMJD6Q6NYC1 403 aaPredicted RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 OR4C13Q8NGP0 309 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 TTTY12Q9BZ98 90 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 TRDCB7Z8K6 153 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 CA2P00918 260 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 RIGQ13278 110 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 KCNMB1Q16558 191 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 SMRP1Q8NCR6 262 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 ZNF552Q9H707 407 aaPredicted RBP11.03□□□□□ -0.64
SPG11-203ENST00000535302 PSMB11A5LHX3 300 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 NAT2P11245 290 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 OR4A47Q6IF82 309 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 STRCQ7RTU9 1775 aa11.03□□□□□ -0.64
SPG11-203ENST00000535302 OOEPA6NGQ2 149 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms