RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 AWAT2Q6E213 333 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 RAB12Q6IQ22 244 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 FOXRED2Q8IWF2 684 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 C8orf59Q8N0T1 100 aaPredicted RBP7.04□□□□□ -1.28
COPB1-211ENST00000534234 C8orf31Q8N9H6 132 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 OR2T10Q8NGZ9 312 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 OR4K15Q8NH41 348 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 ST6GALNAC6Q969X2 333 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 SELENOIQ9C0D9 397 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 BANF2Q9H503 90 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 RAB9BQ9NP90 201 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 ETAA1Q9NY74 926 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 CNOT2Q9NZN8 540 aaKnown RBP7.04□□□□□ -1.28
COPB1-211ENST00000534234 RCC2Q9P258 522 aaKnown RBP7.04□□□□□ -1.28
COPB1-211ENST00000534234 GNG12Q9UBI6 72 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 PEX16Q9Y5Y5 336 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 NOTCH3Q9UM47 2321 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 DSCAML1Q8TD84 2053 aa7.04□□□□□ -1.28
COPB1-211ENST00000534234 C12orf77C9JDV5 145 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 CRTAPO75718 401 aaPredicted RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 MGMTP16455 207 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 FUT3P21217 361 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 IL3RAP26951 378 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 CD1BP29016 333 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 VHLP40337 213 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 ZNF134P52741 427 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 RPL23AP62750 156 aaKnown RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 DOC2BQ14184 412 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 RCN1Q15293 331 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 Q3ZCU0 254 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 C6orf183Q5T699 404 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 LAIR2Q6ISS4 152 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 AHSA2Q719I0 299 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 TGIF2LXQ8IUE1 241 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 MRPL41Q8IXM3 137 aaKnown RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 STPG2Q8N412 459 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 PRR18Q8N4B5 295 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 COMMD1Q8N668 190 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 TMEM104Q8NE00 496 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 BPIFB6Q8NFQ5 453 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 OR51D1Q8NGF3 324 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 RTN4IP1Q8WWV3 396 aaPredicted RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 DERL3Q96Q80 235 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 ZFP57Q9NU63 452 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 PLCXD1Q9NUJ7 323 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 PSORS1C1Q9UIG5 152 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 PRKDCP78527 4128 aaKnown RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 UBE2QL1A1L167 161 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 FAM90A10PA6NDY2 464 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 FAM90A7PA6NKC0 464 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 NUDT19A8MXV4 375 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 FAM90A23PA8MXZ1 464 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 ZNF736B4DX44 427 aaPredicted RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 MYL12BO14950 172 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 SLC31A2O15432 143 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 CA11O75493 328 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 MOSP00540 346 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 HBZP02008 142 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 CD1AP06126 327 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 GLAP06280 429 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 RCC1P18754 421 aaPredicted RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 THBS3P49746 956 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 WNT4P56705 351 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 CT45A1Q5HYN5 189 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 DEFB121Q5J5C9 76 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 STEAP3Q658P3 488 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 SIGIRRQ6IA17 410 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 SLC25A48Q6ZT89 311 aaKnown RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 C18orf65Q6ZTR6 163 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 OR2W3Q7Z3T1 314 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 LYPD6Q86Y78 171 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 IZUMO1Q8IYV9 350 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 GAPTQ8N292 157 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 Q8N6K4 173 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 NANOGP1Q8N7R0 232 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 ZNF439Q8NDP4 499 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 OR10V1Q8NGI7 309 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 OR1L1Q8NH94 360 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 CT45A3Q8NHU0 189 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 ABCG5Q9H222 651 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 OR2S2Q9NQN1 319 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 PLSCR3Q9NRY6 295 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 LIN7CQ9NUP9 197 aaKnown RBP7.03□□□□□ -1.28
COPB1-211ENST00000534234 ERGIC3Q9Y282 383 aa7.03□□□□□ -1.28
COPB1-211ENST00000534234 PLXNB1O43157 2135 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 K7EIL1 84 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 AP4M1O00189 453 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 SC5DO75845 299 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 MAPK3P27361 379 aaPredicted RBP7.02□□□□□ -1.29
COPB1-211ENST00000534234 SLC6A1P30531 599 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 HOXD3P31249 432 aaPredicted RBP7.02□□□□□ -1.29
COPB1-211ENST00000534234 GPR12P47775 334 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 PNLIPRP3Q17RR3 467 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 KIAA2026Q5HYC2 2103 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 OGFRL1Q5TC84 451 aaPredicted RBP7.02□□□□□ -1.29
COPB1-211ENST00000534234 TEX38Q6PEX7 206 aa7.02□□□□□ -1.29
COPB1-211ENST00000534234 TRAT1Q6PIZ9 186 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms