RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 NDUFA11Q86Y39 141 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 LINC00311Q8N616 119 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 TMEM104Q8NE00 496 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 OR56B4Q8NH76 319 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 WIPF2Q8TF74 440 aaPredicted RBP12.98□□□□□ -0.33
CCDC180-213ENST00000534189 SGCDQ92629 289 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 Q96M66 194 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 ANKRD60Q9BZ19 345 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
CCDC180-213ENST00000534189 A0A1W2PPE3 182 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 ERICH4A6NGS2 130 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 PDCD6O75340 191 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 MPIG6BO95866 241 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 SNRNP70P08621 437 aaKnown RBP12.97□□□□□ -0.33
CCDC180-213ENST00000534189 SRMP19623 302 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 TRAM1Q15629 374 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 BEAN1Q3B7T3 259 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 TMEM95Q3KNT9 176 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 C9orf152Q5JTZ5 239 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 FAM27D1Q5T7N8 215 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 LIPKQ5VXJ0 399 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 LRRTM1Q86UE6 522 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 DRAM1Q8N682 238 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 OR5AU1Q8NGC0 362 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 OR4K15Q8NH41 348 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 UBALD1Q8TB05 177 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 FAM46BQ96A09 425 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 CCDC90BQ9GZT6 254 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 ISYNA1Q9NPH2 558 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 MOB4Q9Y3A3 225 aa12.97□□□□□ -0.33
CCDC180-213ENST00000534189 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
CCDC180-213ENST00000534189 A0A1W2PPI3 338 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 C12orf77C9JDV5 145 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 CCRL2O00421 344 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 HSD17B6O14756 317 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 SC5DO75845 299 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 OPN1MWP04001 364 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 LPLP06858 475 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 UCHL1P09936 223 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 HSMCR30P0CW71 290 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 VHLP40337 213 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 GP2P55259 537 aaKnown RBP12.96□□□□□ -0.33
CCDC180-213ENST00000534189 LOXL3P58215 753 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 ZNF816Q0VGE8 651 aaPredicted RBP12.96□□□□□ -0.33
CCDC180-213ENST00000534189 TPBGQ13641 420 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 C1orf100Q5SVJ3 147 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 MOB3BQ86TA1 216 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 LYG1Q8N1E2 194 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 GAPTQ8N292 157 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 OR4F17Q8NGA8 305 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 OR4F4Q96R69 305 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 CITED2Q99967 270 aaPredicted RBP12.96□□□□□ -0.33
CCDC180-213ENST00000534189 KCNIP1Q9NZI2 227 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 GNG12Q9UBI6 72 aa12.96□□□□□ -0.33
CCDC180-213ENST00000534189 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 UBE2QL1A1L167 161 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 AMY1AP04745 511 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 AMY2AP04746 511 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 TMEM11P17152 192 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 CRHBPP24387 322 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 PSMA1P25786 263 aaKnown RBP12.95□□□□□ -0.34
CCDC180-213ENST00000534189 HTR2CP28335 458 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 MLLT11Q13015 90 aaPredicted RBP12.95□□□□□ -0.34
CCDC180-213ENST00000534189 DIAPH2-AS1Q14236 149 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 HNF4GQ14541 408 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 VAX1Q5SQQ9 334 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 KPRPQ5T749 579 aaPredicted RBP12.95□□□□□ -0.34
CCDC180-213ENST00000534189 SIGIRRQ6IA17 410 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 IZUMO2Q6UXV1 221 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 PRSS48Q7RTY5 328 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 ZNF554Q86TJ5 538 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 KCNG3Q8TAE7 436 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 TMEM203Q969S6 136 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 NEDD4LQ96PU5 975 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 TENM3Q9P273 2699 aa12.95□□□□□ -0.34
CCDC180-213ENST00000534189 DNAH3Q8TD57 4116 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 IGHV1-3A0A0C4DH29 117 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 ARL6IP5O75915 188 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 IGKV1D-33P01593 117 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 IGKV1-33P01594 117 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 HBZP02008 142 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 RANBP1P43487 201 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
CCDC180-213ENST00000534189 NKAPLQ5M9Q1 402 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 STEAP3Q658P3 488 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 OR10K2Q6IF99 312 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 PRR18Q8N4B5 295 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 OR6M1Q8NGM8 313 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 R3HDM4Q96D70 268 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 TMEM59Q9BXS4 323 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 TAF9BQ9HBM6 251 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 LRRC42Q9Y546 428 aa12.94□□□□□ -0.34
CCDC180-213ENST00000534189 SH2D7A6NKC9 451 aaPredicted RBP12.93□□□□□ -0.34
CCDC180-213ENST00000534189 SLC22A1O15245 554 aa12.93□□□□□ -0.34
CCDC180-213ENST00000534189 FGF16O43320 207 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms