RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 TMEM219Q86XT9 240 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 GAPTQ8N292 157 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 OR10V1Q8NGI7 309 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 ARHGAP5-AS1Q96IT6 56 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 KCTD7Q96MP8 289 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 URM1Q9BTM9 101 aaKnown RBP10.8□□□□□ -0.68
CMTM1-219ENST00000533953 ZMAT3Q9HA38 289 aaKnown RBP10.8□□□□□ -0.68
CMTM1-219ENST00000533953 LIN7BQ9HAP6 207 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 TAF9BQ9HBM6 251 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 PLEKHJ1Q9NW61 149 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 AK3Q9UIJ7 227 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 DAPK2Q9UIK4 370 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 VPREB3Q9UKI3 123 aa10.8□□□□□ -0.68
CMTM1-219ENST00000533953 BTBD17A6NE02 478 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 TRIM64CA6NLI5 447 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 BUB1B-PAK6H3BSN5 160 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 J3QR06 171 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 SLC31A2O15432 143 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 CHST1O43916 411 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 GLAP06280 429 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 SNRPBP14678 240 aaKnown RBP10.79□□□□□ -0.68
CMTM1-219ENST00000533953 PRRX1P54821 245 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 LOXL3P58215 753 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 SRSF4Q08170 494 aaKnown RBP10.79□□□□□ -0.68
CMTM1-219ENST00000533953 GNMTQ14749 295 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 HLA-DRB5Q30154 266 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 OR52L2PQ8NGH6 319 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 OR9G1Q8NH87 305 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 SETD6Q8TBK2 473 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 PECRQ9BY49 303 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 FBLN5Q9UBX5 448 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 RAB22AQ9UL26 194 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 SIGLEC9Q9Y336 463 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
CMTM1-219ENST00000533953 TENM1Q9UKZ4 2725 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 A0A075B6Q4 140 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 NOTOA8MTQ0 251 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 LY6LH3BQJ8 138 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 ORC5O43913 435 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 RAG2P55895 527 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 TPTE2P1Q5T6R2 138 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 Q6ZSV7 163 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 Q6ZTK2 550 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 OR5R1Q8NH85 324 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 ZNF596Q8TC21 504 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 MMP28Q9H239 520 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 CHMP1AQ9HD42 196 aaPredicted RBP10.78□□□□□ -0.68
CMTM1-219ENST00000533953 MBNL3Q9NUK0 354 aaKnown RBP10.78□□□□□ -0.68
CMTM1-219ENST00000533953 GFOD1Q9NXC2 390 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 ELF5Q9UKW6 265 aaPredicted RBP10.78□□□□□ -0.68
CMTM1-219ENST00000533953 KCNK7Q9Y2U2 307 aa10.78□□□□□ -0.68
CMTM1-219ENST00000533953 A6NDX4 124 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 LEUTXA8MZ59 168 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 F2RL2O00254 374 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 SPINT2O43291 252 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 AIREO43918 545 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 CA11O75493 328 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 GNB3P16520 340 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 CFPP27918 469 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 REG1BP48304 166 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 COMPP49747 757 aaPredicted RBP10.77□□□□□ -0.69
CMTM1-219ENST00000533953 ZNF134P52741 427 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 FOXL1Q12952 345 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 C6orf183Q5T699 404 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 IDNKQ5T6J7 187 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 SFXN4Q6P4A7 337 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 TPRA1Q86W33 373 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 C3orf56Q8N813 242 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 ATG5Q9H1Y0 275 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 VCX3AQ9NNX9 186 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 ABCB10Q9NRK6 738 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 KCNIP1Q9NZI2 227 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 GNG12Q9UBI6 72 aa10.77□□□□□ -0.69
CMTM1-219ENST00000533953 VGLL3A8MV65 326 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 H3BUI4 141 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 RAB27BO00194 218 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 NAPSAO96009 420 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 PPP1CCP36873 323 aaKnown RBP10.76□□□□□ -0.69
CMTM1-219ENST00000533953 RPS19P39019 145 aaKnown RBP10.76□□□□□ -0.69
CMTM1-219ENST00000533953 CT45A1Q5HYN5 189 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 HIST2H2BDQ6DRA6 164 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 DHRS7BQ6IAN0 325 aaPredicted RBP10.76□□□□□ -0.69
CMTM1-219ENST00000533953 GDPGP1Q6ZNW5 385 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 OR10A7Q8NGE5 316 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 OR56B1Q8NGI3 324 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 OR10R2Q8NGX6 335 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 CT45A3Q8NHU0 189 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 LGALS14Q8TCE9 139 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 RAB3CQ96E17 227 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 FUNDC2Q9BWH2 189 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 NAA50Q9GZZ1 169 aaKnown RBP10.76□□□□□ -0.69
CMTM1-219ENST00000533953 OR2S2Q9NQN1 319 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 TCF19Q9Y242 345 aa10.76□□□□□ -0.69
CMTM1-219ENST00000533953 HAX1O00165 279 aa10.75□□□□□ -0.69
CMTM1-219ENST00000533953 SCTP09683 121 aa10.75□□□□□ -0.69
CMTM1-219ENST00000533953 KRTAP10-3P60369 221 aa10.75□□□□□ -0.69
CMTM1-219ENST00000533953 NCS1P62166 190 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms