RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 IFNA21P01568 189 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 IFNA17P01571 189 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 HLA-DMBP28068 263 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 IFNGR2P38484 337 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF137PP52743 207 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 TSPAN31Q12999 210 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF57Q68EA5 555 aaPredicted RBP7.71□□□□□ -1.18
CSDE1-215ENST00000533818 RPL13AP3Q6NVV1 102 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 TMEM179BQ7Z7N9 219 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 UBE2DNLQ8IWF7 75 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 LYPD1Q8N2G4 141 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 OR5T1Q8NG75 326 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 OR52M1Q8NGK5 317 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 GNPDA2Q8TDQ7 276 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 HRH4Q9H3N8 390 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 FBXL15Q9H469 300 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 SPAG4Q9NPE6 437 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 GTF2A1LQ9UNN4 478 aa7.71□□□□□ -1.18
CSDE1-215ENST00000533818 VPS13BQ7Z7G8 4022 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 A0A1B0GTI1 187 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 DHRS7CA6NNS2 312 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 RIIAD1A6NNX1 92 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 H3BUA1 57 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 BMPR1BO00238 502 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 RGS16O15492 202 aaPredicted RBP7.7□□□□□ -1.18
CSDE1-215ENST00000533818 LANCL1O43813 399 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 IFNGP01579 166 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 ATP1B3P54709 279 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 DEFA5Q01523 94 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 Q6ZTC4 211 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF367Q7RTV3 350 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 ZDHHC13Q8IUH4 622 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 CENPSQ8N2Z9 138 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 OR8D4Q8NGM9 314 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 OR4A5Q8NH83 315 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 GFOD1Q9NXC2 390 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 MDFICQ9P1T7 246 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 LAMP5Q9UJQ1 280 aa7.7□□□□□ -1.18
CSDE1-215ENST00000533818 IGHV3-43A0A0B4J1X8 118 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 FXYD1O00168 92 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 RRHO14718 337 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 GATBO75879 557 aaKnown RBP7.69□□□□□ -1.18
CSDE1-215ENST00000533818 AMBPP02760 352 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 IGHV3-43DP0DP04 118 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 ALOX5APP20292 161 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 GZMHP20718 246 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 RBP2P50120 134 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 HCCSP53701 268 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 MTCP1P56278 107 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 SMIM11AP58511 58 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF829Q3KNS6 432 aaPredicted RBP7.69□□□□□ -1.18
CSDE1-215ENST00000533818 PAN3Q58A45 887 aaKnown RBP7.69□□□□□ -1.18
CSDE1-215ENST00000533818 SAMD4BQ5PRF9 694 aaKnown RBP7.69□□□□□ -1.18
CSDE1-215ENST00000533818 DEGS2Q6QHC5 323 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 CLCC1Q96S66 551 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 NDUFAF3Q9BU61 184 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 TSSK6Q9BXA6 273 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 MROQ9BYG7 248 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 OR51V1Q9H2C8 321 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 INTS9Q9NV88 658 aaKnown RBP7.69□□□□□ -1.18
CSDE1-215ENST00000533818 IL20Q9NYY1 176 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 UBQLN2Q9UHD9 624 aa7.69□□□□□ -1.18
CSDE1-215ENST00000533818 FAT1Q14517 4588 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 IGKV1-12A0A0C4DH73 117 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 H0YJX3 145 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 GADD45GO95257 159 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 SERPINA3P01011 423 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 IGKV1D-12P01611 117 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 SCTP09683 121 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 NCK1P16333 377 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF3P17036 446 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 CBLN1P23435 193 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 SF3A3Q12874 501 aaKnown RBP eCLIP7.68□□□□□ -1.18
CSDE1-215ENST00000533818 PDZK1IP1Q13113 114 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 CDK5R1Q15078 307 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 MED22Q15528 200 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 SPATS1Q496A3 300 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 CT45A1Q5HYN5 189 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 BCL2L15Q5TBC7 163 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 RSBN1Q5VWQ0 802 aaPredicted RBP7.68□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF562Q6V9R5 426 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 Q6ZSR3 168 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 KCTD20Q7Z5Y7 419 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 ELMOD2Q8IZ81 293 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 SLC38A6Q8IZM9 456 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 OR2C3Q8N628 320 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 OR1L6Q8NGR2 347 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 CT45A3Q8NHU0 189 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 CACNG8Q8WXS5 425 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 THRSPQ92748 146 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 ARL11Q969Q4 196 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 USMG5Q96IX5 58 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 BAIAP2Q9UQB8 552 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 RNF213Q63HN8 5207 aa7.68□□□□□ -1.18
CSDE1-215ENST00000533818 MPTX1A8MV57 137 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 GSTA4O15217 222 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF254O75437 659 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 CD74P04233 296 aa7.67□□□□□ -1.18
CSDE1-215ENST00000533818 ZNF134P52741 427 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms