RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	OR56B4	Q8NH76	319 aa		14.1	□□□□□ -0.15
BBS1-223	ENST00000533644	UFD1	Q92890	307 aa		14.1	□□□□□ -0.15
BBS1-223	ENST00000533644	ISYNA1	Q9NPH2	558 aa		14.1	□□□□□ -0.15
BBS1-223	ENST00000533644	PEX16	Q9Y5Y5	336 aa		14.1	□□□□□ -0.15
BBS1-223	ENST00000533644		A0A1W2PPE3	182 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	ERICH4	A6NGS2	130 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	ADARB2-AS1	A8MUL3	147 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	HSD17B6	O14756	317 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	PDCD6	O75340	191 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	PEX14	O75381	377 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	SNRNP70	P08621	437 aa	Known RBP	14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	HSPA13	P48723	471 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	ZNF816	Q0VGE8	651 aa	Predicted RBP	14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	TMEM30B	Q3MIR4	351 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644		Q3ZCU0	254 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	ABCA11P	Q4W5N1	156 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	HSD17B12	Q53GQ0	312 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	C6orf183	Q5T699	404 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	SYT6	Q5T7P8	510 aa	Predicted RBP	14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	GLT8D1	Q68CQ7	371 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	IZUMO2	Q6UXV1	221 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	NDUFA11	Q86Y39	141 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	UBALD1	Q8TB05	177 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	FAM46B	Q96A09	425 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	CYYR1	Q96J86	154 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	TRAPPC2L	Q9UL33	140 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	MOB4	Q9Y3A3	225 aa		14.09	□□□□□ -0.15
BBS1-223	ENST00000533644	OPN1MW	P04001	364 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	OPN1MW2	P0DN77	364 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	OPN1MW3	P0DN78	364 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	VSIG8	P0DPA2	414 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	SRM	P19623	302 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	MLLT11	Q13015	90 aa	Predicted RBP	14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	FAM53A	Q6NSI3	398 aa	Predicted RBP	14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	TRAT1	Q6PIZ9	186 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	PRSS48	Q7RTY5	328 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	ZNF439	Q8NDP4	499 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	OR4K15	Q8NH41	348 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	ST6GALNAC6	Q969X2	333 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	CITED2	Q99967	270 aa	Predicted RBP	14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	RAB9B	Q9NP90	201 aa		14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	MBNL3	Q9NUK0	354 aa	Known RBP	14.08	□□□□□ -0.16
BBS1-223	ENST00000533644	IGHV3-43	A0A0B4J1X8	118 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	SLC22A1	O15245	554 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	SPINT2	O43291	252 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	MPIG6B	O95866	241 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	LPL	P06858	475 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	IGHV3-43D	P0DP04	118 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	RPS25	P62851	125 aa	Known RBP	14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	RPS27A	P62979	156 aa	Known RBP	14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	TMEM91	Q6ZNR0	172 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	ZNF554	Q86TJ5	538 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	LYG1	Q8N1E2	194 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	TMEM203	Q969S6	136 aa		14.07	□□□□□ -0.16
BBS1-223	ENST00000533644	IGHV1-3	A0A0C4DH29	117 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	UBE2QL1	A1L167	161 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	SH2D7	A6NKC9	451 aa	Predicted RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	CCRL2	O00421	344 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	HBZ	P02008	142 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	GAPDH	P04406	335 aa	Known RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	HSMCR30	P0CW71	290 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	CPE	P16870	476 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	RCC1	P18754	421 aa	Predicted RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	PSMA1	P25786	263 aa	Known RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	CHAT	P28329	748 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	HTR2C	P28335	458 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	ZNF137P	P52743	207 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	QRFP	P83859	136 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	CD83	Q01151	205 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	EMX1	Q04741	257 aa	Predicted RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	UNC119	Q13432	240 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	EBI3	Q14213	229 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	TRAM1	Q15629	374 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	NSUN5P1	Q3KNT7	163 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	OR10K2	Q6IF99	312 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	SLC25A48	Q6ZT89	311 aa	Known RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	IZUMO1	Q8IYV9	350 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	OR5AU1	Q8NGC0	362 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	OR6M1	Q8NGM8	313 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	OR1L1	Q8NH94	360 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	MRPL30	Q8TCC3	161 aa	Known RBP	14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	TM2D1	Q9BX74	207 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	TMEM59	Q9BXS4	323 aa		14.06	□□□□□ -0.16
BBS1-223	ENST00000533644	TMEM14DP	A8MWL7	114 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	SLC31A2	O15432	143 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	FGF16	O43320	207 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	BPNT1	O95861	308 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	IGKV1D-33	P01593	117 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	IGKV1-33	P01594	117 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	TMEM11	P17152	192 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	TBCE	Q15813	527 aa	Predicted RBP	14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	TCTEX1D4	Q5JR98	221 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	C5orf56	Q8N8D9	126 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	KCNG3	Q8TAE7	436 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	GFI1	Q99684	422 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	MGLL	Q99685	303 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	SULT4A1	Q9BR01	284 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	CCDC90B	Q9GZT6	254 aa		14.05	□□□□□ -0.16
BBS1-223	ENST00000533644	TAF9B	Q9HBM6	251 aa		14.05	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms