RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 MSL2Q9HCI7 577 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 CCL28Q9NRJ3 127 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 VWA8A3KMH1 1905 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 C17orf112F2Z3M2 114 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 AGFG2O95081 481 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 H2BFSP57053 126 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 PMS2CLQ68D20 193 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 SLC25A42Q86VD7 318 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 OR2C3Q8N628 320 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 RBMXL3Q8N7X1 1067 aaKnown RBP10.67□□□□□ -0.7
BDNF-218ENST00000533246 RPS4Y2Q8TD47 263 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 BCL2L2Q92843 193 aaPredicted RBP10.67□□□□□ -0.7
BDNF-218ENST00000533246 KCNK17Q96T54 332 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 KLHDC3Q9BQ90 382 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 ZNF355PQ9NSJ1 428 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 LAMP3Q9UQV4 416 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 LHFPL6Q9Y693 200 aa10.67□□□□□ -0.7
BDNF-218ENST00000533246 TRGV8A0A0C4DH27 118 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 TRBV5-5A0A0J9YX44 114 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 COLCA2A8K830 154 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 ZBTB25P24278 435 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 RBPJQ06330 500 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 GPX7Q96SL4 187 aaPredicted RBP10.66□□□□□ -0.7
BDNF-218ENST00000533246 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 TPPP3Q9BW30 176 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 GPR35Q9HC97 309 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 STRAPQ9Y3F4 350 aaKnown RBP10.66□□□□□ -0.7
BDNF-218ENST00000533246 TRAV17A0A0B4J275 112 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 LRP5LA4QPB2 252 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 TMEM238C9JI98 176 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 TMEM183BQ1AE95 376 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 OR1L6Q8NGR2 347 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 CHST5Q9GZS9 411 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 LPAR5Q9H1C0 372 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 LYRM2Q9NU23 88 aaPredicted RBP10.66□□□□□ -0.7
BDNF-218ENST00000533246 OR6C3Q9NZP0 311 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 PITPNC1Q9UKF7 332 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 FAM208BQ5VWN6 2430 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 LOC285556D6RIA3 1793 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 DHRS7CA6NNS2 312 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 GNG7O60262 68 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 PGA3P0DJD8 388 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 FGF8P55075 233 aaPredicted RBP10.66□□□□□ -0.7
BDNF-218ENST00000533246 ZNF92Q03936 586 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 DCAF10Q5QP82 559 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 APCDD1LQ8NCL9 501 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 LFNGQ8NES3 379 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 OR2H1Q9GZK4 316 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
BDNF-218ENST00000533246 CHTOPQ9Y3Y2 248 aaKnown RBP10.66□□□□□ -0.7
BDNF-218ENST00000533246 MTCL1Q9Y4B5 1905 aaKnown RBP10.65□□□□□ -0.7
BDNF-218ENST00000533246 PATJQ8NI35 1801 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 FCGR3BO75015 233 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 SLC25A4P12235 298 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 RCC1P18754 421 aaPredicted RBP10.65□□□□□ -0.7
BDNF-218ENST00000533246 PSG4Q00888 419 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 ROM1Q03395 351 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 C19orf48Q6RUI8 117 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 GAPTQ8N292 157 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 TNFRSF14Q92956 283 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 UHRF2Q96PU4 802 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 LIN7CQ9NUP9 197 aaKnown RBP10.65□□□□□ -0.7
BDNF-218ENST00000533246 C1QL1O75973 258 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 BCL3P20749 454 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 ERVFC1-1P60608 527 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 BAGE3Q86Y29 109 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 BAGE2Q86Y30 109 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 SELENOHQ8IZQ5 122 aaKnown RBP10.65□□□□□ -0.7
BDNF-218ENST00000533246 ASB13Q8WXK3 278 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 SLC25A28Q96A46 364 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 TMEM38BQ9NVV0 291 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 HSF4Q9ULV5 492 aa10.65□□□□□ -0.7
BDNF-218ENST00000533246 PPYP01298 95 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 OR5G3P0C626 314 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 TNFSF10P50591 281 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 KLF3P57682 345 aaPredicted RBP10.65□□□□□ -0.71
BDNF-218ENST00000533246 KRTDAPP60985 99 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 HIST1H3AP68431 136 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 BTNL3Q6UXE8 466 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 S1PR3Q99500 378 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 TMED3Q9Y3Q3 217 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 PTPRQQ9UMZ3 2332 aa10.65□□□□□ -0.71
BDNF-218ENST00000533246 MDFIC2A0A1B0GVS7 189 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 PRR32B1ATL7 298 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 MKRN2OSH3BPM6 223 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 TRAF3IP2O43734 574 aaPredicted RBP10.64□□□□□ -0.71
BDNF-218ENST00000533246 SLC25A17O43808 307 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 OR7C2O60412 319 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 SCGB2A1O75556 95 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 CNIH1O95406 144 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 ACTL6AO96019 429 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 CRYABP02511 175 aaKnown RBP10.64□□□□□ -0.71
BDNF-218ENST00000533246 LPAR6P43657 344 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 GNB1P62873 340 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 ATP1A1-AS1Q5TC04 95 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 OR4A47Q6IF82 309 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 TBC1D26Q86UD7 250 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 SAP25Q8TEE9 199 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 ACACBO00763 2458 aa10.64□□□□□ -0.71
BDNF-218ENST00000533246 A0A0G2JK05 382 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms