RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SPINT2O43291 252 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 TMEM127O75204 238 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 IGHV3-7P01780 117 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 IGHV4-59P01825 116 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 HBZP02008 142 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 PAX6P26367 422 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 IER3P46695 156 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 RPL5P46777 297 aaKnown RBP9.71□□□□□ -0.86
SSBP3-214ENST00000533209 SERPINB10P48595 397 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 LOXL3P58215 753 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 OLFML2AQ68BL7 652 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 FAM53AQ6NSI3 398 aaPredicted RBP9.71□□□□□ -0.86
SSBP3-214ENST00000533209 TRAT1Q6PIZ9 186 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 ZNF554Q86TJ5 538 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 TMEM86BQ8N661 226 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 OR52M1Q8NGK5 317 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 OR1L1Q8NH94 360 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 ZFAND2BQ8WV99 257 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 SSMEM1Q8WWF3 244 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 TMEM158Q8WZ71 300 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 LEAP2Q969E1 77 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 SLC25A46Q96AG3 418 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 SLC25A38Q96DW6 304 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 MEGF9Q9H1U4 602 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 ZMAT3Q9HA38 289 aaKnown RBP9.71□□□□□ -0.86
SSBP3-214ENST00000533209 TAF9BQ9HBM6 251 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 ETV7Q9Y603 341 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 POMT1Q9Y6A1 747 aa9.71□□□□□ -0.86
SSBP3-214ENST00000533209 IGHV3-43A0A0B4J1X8 118 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 RNF212BA8MTL3 300 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 SDCBPO00560 298 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 MFNGO00587 321 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 RNASE1P07998 156 aaKnown RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 IGHV3-43DP0DP04 118 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 HIST1H1DP16402 221 aaKnown RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 GNB3P16520 340 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 PRRX1P54821 245 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 HMGN3Q15651 99 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 HLA-DRB5Q30154 266 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 MINOS1Q5TGZ0 78 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 MOB1BQ7L9L4 216 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 OR9G1Q8NH87 305 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 NDNFQ8TB73 568 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 ZNF596Q8TC21 504 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 FAM216AQ8WUB2 273 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 MALSU1Q96EH3 234 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 CMSS1Q9BQ75 279 aaKnown RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 RIMS4Q9H426 269 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 CHMP1AQ9HD42 196 aaPredicted RBP9.7□□□□□ -0.86
SSBP3-214ENST00000533209 RAB9BQ9NP90 201 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 C12orf4Q9NQ89 552 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 TNFRSF19Q9NS68 423 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 RHBDL2Q9NX52 303 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 GFOD1Q9NXC2 390 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 KCNIP1Q9NZI2 227 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 ABRACLQ9P1F3 81 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 SPATA2Q9UM82 520 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 PSG11Q9UQ72 335 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 MINOS1-NBL1R4GNA1 71 aa9.7□□□□□ -0.86
SSBP3-214ENST00000533209 A0A075B6Q4 140 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 SERPINE3A8MV23 424 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 LY6LH3BQJ8 138 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 J3QR06 171 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 TOR1AO14656 332 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 HTR1DP28221 377 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 GNG10P50151 68 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 SSX2Q16385 188 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 AANATQ16613 207 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 CDNFQ49AH0 187 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 CLVS1Q8IUQ0 354 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-214ENST00000533209 PRR18Q8N4B5 295 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 ZNF439Q8NDP4 499 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 PIFOQ8TCI5 191 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 CHIAQ9BZP6 476 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 MMP28Q9H239 520 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 DPAGT1Q9H3H5 408 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 Q9N2K0 584 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSBP3-214ENST00000533209 DPM3Q9P2X0 92 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
SSBP3-214ENST00000533209 ELF5Q9UKW6 265 aaPredicted RBP9.69□□□□□ -0.86
SSBP3-214ENST00000533209 A0A1W2PPE3 182 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 VGLL3A8MV65 326 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 BUB1B-PAK6H3BSN5 160 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 SCGNO76038 276 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 CD3GP09693 182 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 HTD2P86397 168 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 LRRC75BQ2VPJ9 315 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 Q3ZCU0 254 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 C16orf87Q6PH81 154 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 LINC00311Q8N616 119 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 C8orf31Q8N9H6 132 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 OR52L2PQ8NGH6 319 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 OR10V1Q8NGI7 309 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 SETD6Q8TBK2 473 aa9.68□□□□□ -0.86
SSBP3-214ENST00000533209 KCTD12Q96CX2 325 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms