RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 FAM110DQ8TAY7 271 aaPredicted RBP24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 GFOD1Q9NXC2 390 aa24.2■■□□□ 1.46
SSSCA1-207ENST00000533115 A0A1W2PPI3 338 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 UBE2QL1A1L167 161 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 C12orf77C9JDV5 145 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 PDCD6O75340 191 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 VSIG8P0DPA2 414 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 CD37P11049 281 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 CPEP16870 476 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 MAP2K4P45985 399 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 RPS25P62851 125 aaKnown RBP24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 TMEM95Q3KNT9 176 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 C6orf183Q5T699 404 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 TMEM91Q6ZNR0 172 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 WIPF2Q8TF74 440 aaPredicted RBP24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 OCSTAMPQ9BR26 566 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 RAB9BQ9NP90 201 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 RAB26Q9ULW5 256 aa24.19■■□□□ 1.46
SSSCA1-207ENST00000533115 IGHV3-43A0A0B4J1X8 118 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 SPINT2O43291 252 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 FBXO24O75426 580 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 ATP6V1G2O95670 118 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 IGHV3-43DP0DP04 118 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 PSMA1P25786 263 aaKnown RBP24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 HTR2CP28335 458 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 OR10K2Q6IF99 312 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 OR8H3Q8N146 312 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 LINC00311Q8N616 119 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 DRAM1Q8N682 238 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 C8orf31Q8N9H6 132 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 OR56B4Q8NH76 319 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 MGLLQ99685 303 aa24.18■■□□□ 1.46
SSSCA1-207ENST00000533115 SLC22A1O15245 554 aa24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 SNRNP70P08621 437 aaKnown RBP24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 CD28P10747 220 aa24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 ABCA11PQ4W5N1 156 aa24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 TRAT1Q6PIZ9 186 aa24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 CYYR1Q96J86 154 aa24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 BLOC1S6Q9UL45 172 aa24.17■■□□□ 1.46
SSSCA1-207ENST00000533115 RPS27AP62979 156 aaKnown RBP24.16■■□□□ 1.46
SSSCA1-207ENST00000533115 TMEM30BQ3MIR4 351 aa24.16■■□□□ 1.46
SSSCA1-207ENST00000533115 Q3ZCU0 254 aa24.16■■□□□ 1.46
SSSCA1-207ENST00000533115 FAM53AQ6NSI3 398 aaPredicted RBP24.16■■□□□ 1.46
SSSCA1-207ENST00000533115 KCNG3Q8TAE7 436 aa24.16■■□□□ 1.46
SSSCA1-207ENST00000533115 TMEM59Q9BXS4 323 aa24.16■■□□□ 1.46
SSSCA1-207ENST00000533115 M0QZK8 103 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 HSD17B6O14756 317 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 HBZP02008 142 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 AMY1AP04745 511 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 AMY2AP04746 511 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 RCC1P18754 421 aaPredicted RBP24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 ZNF816Q0VGE8 651 aaPredicted RBP24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 NKAPLQ5M9Q1 402 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 OR6M1Q8NGM8 313 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 NEDD4LQ96PU5 975 aa24.15■■□□□ 1.46
SSSCA1-207ENST00000533115 CCRL2O00421 344 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 ARL6IP5O75915 188 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 GAPDHP04406 335 aaKnown RBP24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 UNC119Q13432 240 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 TBCEQ15813 527 aaPredicted RBP24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 PRR18Q8N4B5 295 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 OR1L1Q8NH94 360 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 KCNK15Q9H427 330 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 MBNL3Q9NUK0 354 aaKnown RBP24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 GNG12Q9UBI6 72 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 MOB4Q9Y3A3 225 aa24.14■■□□□ 1.45
SSSCA1-207ENST00000533115 NOTCH1P46531 2555 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 TMEM14DPA8MWL7 114 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 WIPF1O43516 503 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 BPNT1O95861 308 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 LPLP06858 475 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 CHATP28329 748 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 QRFPP83859 136 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 HES1Q14469 280 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 LYG1Q8N1E2 194 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 MRPL30Q8TCC3 161 aaKnown RBP24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 GFI1Q99684 422 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 SULT4A1Q9BR01 284 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 TM2D1Q9BX74 207 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 TAF9BQ9HBM6 251 aa24.13■■□□□ 1.45
SSSCA1-207ENST00000533115 SH2D7A6NKC9 451 aaPredicted RBP24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 TMEM11P17152 192 aa24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 IL3RAP26951 378 aa24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 FABP5Q01469 135 aa24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 ZNF367Q7RTV3 350 aa24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 KCNIP1Q9NZI2 227 aa24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 AK6Q9Y3D8 172 aaKnown RBP24.12■■□□□ 1.45
SSSCA1-207ENST00000533115 IGHV1-3A0A0C4DH29 117 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 REG1BP48304 166 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 DEFA6Q01524 100 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 NSUN5P1Q3KNT7 163 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 SLC25A48Q6ZT89 311 aaKnown RBP24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 MOB3BQ86TA1 216 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 ZNF554Q86TJ5 538 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 ZNF439Q8NDP4 499 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 OR10V1Q8NGI7 309 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 ST6GALNAC6Q969X2 333 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 CITED2Q99967 270 aaPredicted RBP24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 NICN1Q9BSH3 213 aa24.11■■□□□ 1.45
SSSCA1-207ENST00000533115 PLGRKTQ9HBL7 147 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms