RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 LPLP06858 475 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 SNRNP70P08621 437 aaKnown RBP13.75□□□□□ -0.21
PHRF1-204ENST00000532550 HSMCR30P0CW71 290 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 VHLP40337 213 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 GP2P55259 537 aaKnown RBP13.75□□□□□ -0.21
PHRF1-204ENST00000532550 DIAPH2-AS1Q14236 149 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 C9orf152Q5JTZ5 239 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 TRAT1Q6PIZ9 186 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 LRRTM1Q86UE6 522 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 OR5AU1Q8NGC0 362 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 OR56B4Q8NH76 319 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 WIPF2Q8TF74 440 aaPredicted RBP13.75□□□□□ -0.21
PHRF1-204ENST00000532550 TMEM203Q969S6 136 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 CITED2Q99967 270 aaPredicted RBP13.75□□□□□ -0.21
PHRF1-204ENST00000532550 GFOD1Q9NXC2 390 aa13.75□□□□□ -0.21
PHRF1-204ENST00000532550 IGHV3-43A0A0B4J1X8 118 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 A0A1W2PPI3 338 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 C12orf77C9JDV5 145 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 CCRL2O00421 344 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 MPIG6BO95866 241 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 IGHV3-43DP0DP04 118 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 TMEM11P17152 192 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 HSPA13P48723 471 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 LOXL3P58215 753 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 HNF4GQ14541 408 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 FBLN7Q53RD9 439 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 C1orf100Q5SVJ3 147 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 MOB3BQ86TA1 216 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 NDUFA11Q86Y39 141 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 PRR18Q8N4B5 295 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 LINC00311Q8N616 119 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 C8orf31Q8N9H6 132 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 KCNIP1Q9NZI2 227 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 GNG12Q9UBI6 72 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 MOB4Q9Y3A3 225 aa13.74□□□□□ -0.21
PHRF1-204ENST00000532550 SH2D7A6NKC9 451 aaPredicted RBP13.73□□□□□ -0.21
PHRF1-204ENST00000532550 HSD17B6O14756 317 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 PDCD6O75340 191 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 SC5DO75845 299 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 OPN1MWP04001 364 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 AMY1AP04745 511 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 AMY2AP04746 511 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 UCHL1P09936 223 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 OPN1MW2P0DN77 364 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 OPN1MW3P0DN78 364 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 CRHBPP24387 322 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 IL3RAP26951 378 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 HTR2CP28335 458 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 ZNF816Q0VGE8 651 aaPredicted RBP13.73□□□□□ -0.21
PHRF1-204ENST00000532550 TPBGQ13641 420 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 TRAM1Q15629 374 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 TMEM30BQ3MIR4 351 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 Q3ZCU0 254 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 SIGIRRQ6IA17 410 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 IZUMO2Q6UXV1 221 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 PRSS48Q7RTY5 328 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 GAPTQ8N292 157 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 OR4F17Q8NGA8 305 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 KCNG3Q8TAE7 436 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 R3HDM4Q96D70 268 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 NEDD4LQ96PU5 975 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 OR4F4Q96R69 305 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 ISYNA1Q9NPH2 558 aa13.73□□□□□ -0.21
PHRF1-204ENST00000532550 IGHV1-3A0A0C4DH29 117 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 IGKV1D-33P01593 117 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 IGKV1-33P01594 117 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 HBZP02008 142 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 VSIG8P0DPA2 414 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 RCC1P18754 421 aaPredicted RBP13.72□□□□□ -0.21
PHRF1-204ENST00000532550 REG1BP48304 166 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 PDLIM3Q53GG5 364 aaPredicted RBP13.72□□□□□ -0.21
PHRF1-204ENST00000532550 NKAPLQ5M9Q1 402 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 OR10K2Q6IF99 312 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 OR1L1Q8NH94 360 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 CNBD2Q96M20 576 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 TAF9BQ9HBM6 251 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 PLXNB1O43157 2135 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 NOTCH3Q9UM47 2321 aa13.72□□□□□ -0.21
PHRF1-204ENST00000532550 ARL6IP5O75915 188 aa13.71□□□□□ -0.21
PHRF1-204ENST00000532550 PSMA1P25786 263 aaKnown RBP13.71□□□□□ -0.21
PHRF1-204ENST00000532550 RPS27AP62979 156 aaKnown RBP13.71□□□□□ -0.21
PHRF1-204ENST00000532550 CD83Q01151 205 aa13.71□□□□□ -0.21
PHRF1-204ENST00000532550 MLLT11Q13015 90 aaPredicted RBP13.71□□□□□ -0.21
PHRF1-204ENST00000532550 FAM53AQ6NSI3 398 aaPredicted RBP13.71□□□□□ -0.21
PHRF1-204ENST00000532550 C1QL4Q86Z23 238 aa13.71□□□□□ -0.21
PHRF1-204ENST00000532550 OR10V1Q8NGI7 309 aa13.71□□□□□ -0.21
PHRF1-204ENST00000532550 MGLLQ99685 303 aa13.71□□□□□ -0.21
PHRF1-204ENST00000532550 TMEM59Q9BXS4 323 aa13.71□□□□□ -0.21
PHRF1-204ENST00000532550 TCRBV4S1A1TA0A5B7 111 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 SLC22A1O15245 554 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 CD37P11049 281 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 CPEP16870 476 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 MAP2K4P45985 399 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 RPS25P62851 125 aaKnown RBP13.7□□□□□ -0.22
PHRF1-204ENST00000532550 STEAP3Q658P3 488 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 TMEM91Q6ZNR0 172 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 SLC25A48Q6ZT89 311 aaKnown RBP13.7□□□□□ -0.22
PHRF1-204ENST00000532550 ZNF554Q86TJ5 538 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 OR4X2Q8NGF9 303 aa13.7□□□□□ -0.22
PHRF1-204ENST00000532550 OR6M1Q8NGM8 313 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms