RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	TRAV1-2	A0A0B4J238	106 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	SDCBP	O00560	298 aa	Predicted RBP	14	□□□□□ -0.17
CTSB-223	ENST00000532370	ORC5	O43913	435 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	IGHV3-43D	P0DP04	118 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	LOXL3	P58215	753 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	DIAPH2-AS1	Q14236	149 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	PRR18	Q8N4B5	295 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	OR10A7	Q8NGE5	316 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	OR1L1	Q8NH94	360 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	MRPL30	Q8TCC3	161 aa	Known RBP	14	□□□□□ -0.17
CTSB-223	ENST00000532370	FCGR1B	Q92637	280 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	FAM3D	Q96BQ1	224 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	LPAR5	Q9H1C0	372 aa		14	□□□□□ -0.17
CTSB-223	ENST00000532370	SOCS1	O15524	211 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	HBZ	P02008	142 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	BLVRB	P30043	206 aa	Predicted RBP	13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	PROK1	P58294	105 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	C2orf76	Q3KRA6	126 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	NR2C2AP	Q86WQ0	139 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	RAB18	Q9NP72	206 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370	GFOD1	Q9NXC2	390 aa		13.99	□□□□□ -0.17
CTSB-223	ENST00000532370		A0A0B4J203	849 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	SMIM30	A4D0T7	59 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370		H3BUI4	141 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	LDLRAD4	O15165	306 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	CA11	O75493	328 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	TNFAIP8	O95379	198 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	NEDD8	Q15843	81 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	LIAT1	Q6ZQX7	453 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	OR2W3	Q7Z3T1	314 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	OR10V1	Q8NGI7	309 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	CREB3L1	Q96BA8	519 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	ZNF696	Q9H7X3	374 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	TAF9B	Q9HBM6	251 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	TXNL4B	Q9NX01	149 aa	Known RBP	13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	STEAP1	Q9UHE8	339 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	NBEAL1	Q6ZS30	2694 aa		13.98	□□□□□ -0.17
CTSB-223	ENST00000532370	TMEM272	A0A1B0GTI8	110 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	IFITM5	A6NNB3	132 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	PDCD5	O14737	125 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	SLC31A2	O15432	143 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	SPINT2	O43291	252 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	GAL	P22466	123 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	MYL9	P24844	172 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	CEACAM3	P40198	252 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	PSMD7	P51665	324 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	EFNB2	P52799	333 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	HABP2	Q14520	560 aa	Predicted RBP	13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	C6orf183	Q5T699	404 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370		Q6ZPA2	131 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	SLC16A12	Q6ZSM3	486 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	FAM89B	Q8N5H3	189 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	OR52M1	Q8NGK5	317 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	OR4C13	Q8NGP0	309 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	OR10X1	Q8NGY0	326 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	RPE	Q96AT9	228 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	NPFFR1	Q9GZQ6	430 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	OR51E2	Q9H255	320 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	MBNL3	Q9NUK0	354 aa	Known RBP	13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	PLEKHJ1	Q9NW61	149 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	FBLN5	Q9UBX5	448 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	PITPNC1	Q9UKF7	332 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	STUB1	Q9UNE7	303 aa		13.97	□□□□□ -0.17
CTSB-223	ENST00000532370	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	RAB3B	P20337	219 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	KIR2DS4	P43632	304 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	VEGFC	P49767	419 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	TMEM50B	P56557	158 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	BLCAP	P62952	87 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	MADCAM1	Q13477	382 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370		Q6ZS46	218 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	TOMM40L	Q969M1	308 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	CITED1	Q99966	193 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	URM1	Q9BTM9	101 aa	Known RBP	13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	ZNF702P	Q9H963	129 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	GNG12	Q9UBI6	72 aa		13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.96	□□□□□ -0.17
CTSB-223	ENST00000532370	TIMM23	O14925	209 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	SLC2A2	P11168	524 aa	Predicted RBP	13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	FGF9	P31371	208 aa	Predicted RBP	13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	BRS3	P32247	399 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	REG1B	P48304	166 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	ZNF134	P52741	427 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	GNMT	Q14749	295 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	HIST2H2BD	Q6DRA6	164 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	CCDC144NL	Q6NUI1	221 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	DRAM1	Q8N682	238 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	OR52L2P	Q8NGH6	319 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	SGMS2	Q8NHU3	365 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	ARHGAP5-AS1	Q96IT6	56 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	RNF167	Q9H6Y7	350 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	RANBP3	Q9H6Z4	567 aa	Predicted RBP	13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	KCNIP1	Q9NZI2	227 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370	AK3	Q9UIJ7	227 aa		13.95	□□□□□ -0.18
CTSB-223	ENST00000532370		A0A1W2PPI3	338 aa		13.94	□□□□□ -0.18
CTSB-223	ENST00000532370	TRIM64C	A6NLI5	447 aa		13.94	□□□□□ -0.18
CTSB-223	ENST00000532370	OOSP1	A8MZH6	123 aa		13.94	□□□□□ -0.18
CTSB-223	ENST00000532370	NAPSA	O96009	420 aa		13.94	□□□□□ -0.18
CTSB-223	ENST00000532370	GADD45A	P24522	165 aa		13.94	□□□□□ -0.18

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