RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 A0A1W2PP11 408 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 SHISA7A6NL88 538 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 AQP7P3A6NL99 342 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 CST7O76096 145 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 DXOO77932 396 aaKnown RBP6.98□□□□□ -1.29
CSDE1-214ENST00000530886 SLC35E2P0CK97 266 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 SLC25A6P12236 298 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 SEC13P55735 322 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF154Q13106 437 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 SQSTM1Q13501 440 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 ACKR1Q16570 336 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 LRRC75BQ2VPJ9 315 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 DNM1P34Q6PK57 102 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 RSG1Q9BU20 258 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 SAMD10Q9BYL1 202 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 VSIRQ9H7M9 311 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 NRN1Q9NPD7 142 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 C3orf85A0A1B0GTC6 90 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 GRIFINA4D1Z8 144 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 PHF1O43189 567 aaPredicted RBP6.98□□□□□ -1.29
CSDE1-214ENST00000530886 RBFOX2O43251 390 aaKnown RBP eCLIP6.98□□□□□ -1.293e-6■■■■□ 22.3
CSDE1-214ENST00000530886 GDF9O60383 454 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 VAMP5O95183 116 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 CLPSP04118 112 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 MRPS34P82930 218 aaKnown RBP6.98□□□□□ -1.29
CSDE1-214ENST00000530886 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 PRAMEF20Q5VT98 475 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 ASB10Q8WXI3 467 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 KCNS1Q96KK3 526 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 FOXQ1Q9C009 403 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 CFAP54Q96N23 3096 aa6.98□□□□□ -1.29
CSDE1-214ENST00000530886 TRAV36DV7A0A075B6V5 113 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 DPRXA6NFQ7 191 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 IGLON5A6NGN9 336 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 J3QW42 95 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SLC33A1O00400 549 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 TRAF3IP2O43734 574 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF823P16415 610 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 CCR2P41597 374 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 POM121L1PQ3SYA9 428 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SELENOHQ8IZQ5 122 aaKnown RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 DOK4Q8TEW6 326 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 NEIL1Q96FI4 390 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 OR2A5Q96R48 311 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 A0A1B0GV72 72 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SOX1O00570 391 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 MPPED1O15442 326 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 NUDT14O95848 222 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SERPINA7P05543 415 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 GLB1P16278 677 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 KRTDAPP60985 99 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 FKBP1BP68106 108 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 CLEC12BQ2HXU8 276 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 C17orf99Q6UX52 265 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 VASH2Q86V25 355 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SCGB1C1Q8TD33 95 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 OR6C1Q96RD1 312 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 COA3Q9Y2R0 106 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 TBL2Q9Y4P3 447 aaKnown RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SPACA6W5XKT8 324 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 C2orf16Q68DN1 1984 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 TRAV9-2A0A087WT02 112 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 PIGBOS1A0A0B4J2F0 54 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 NPIPB13A6NJU9 1138 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 NPIPB4C9JG80 1138 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 TGFBR3LH3BV60 316 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 JMJD7P0C870 316 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 IGLC1P0CG04 106 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 PPIAL4GP0DN37 164 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF17P17021 662 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 CXorf66Q5JRM2 361 aaPredicted RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 TSPO2Q5TGU0 170 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 SAMD13Q5VXD3 122 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 OTPQ5XKR4 325 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 WDR73Q6P4I2 378 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 KLHL24Q6TFL4 600 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 CPEB2Q7Z5Q1 589 aaKnown RBP6.97□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF295-AS1Q8N0V1 137 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF596Q8TC21 504 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 RAB40CQ96S21 281 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
CSDE1-214ENST00000530886 H0YJW9 148 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 SH2D1BO14796 132 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 S1PR2O95136 353 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 GDF1P27539 372 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 SRD5A2P31213 254 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 OR1D5P58170 312 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 POU3F1Q03052 451 aaPredicted RBP6.96□□□□□ -1.29
CSDE1-214ENST00000530886 ZNF525Q8N782 197 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 LHX4Q969G2 390 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 STRADBQ9C0K7 418 aa6.96□□□□□ -1.29
CSDE1-214ENST00000530886 MRPL18Q9H0U6 180 aaKnown RBP6.96□□□□□ -1.29
CSDE1-214ENST00000530886 A0A1W2PNV4 684 aa6.96□□□□□ -1.3
CSDE1-214ENST00000530886 METTL12A8MUP2 240 aa6.96□□□□□ -1.3
CSDE1-214ENST00000530886 DEGS1O15121 323 aa6.96□□□□□ -1.3
CSDE1-214ENST00000530886 TNFSF14O43557 240 aa6.96□□□□□ -1.3
CSDE1-214ENST00000530886 OR7C2O60412 319 aa6.96□□□□□ -1.3
CSDE1-214ENST00000530886 SMIM17P0DL12 118 aa6.96□□□□□ -1.3
CSDE1-214ENST00000530886 VDAC1P21796 283 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms