RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TCL1AP56279 114 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 TAS2R43P59537 309 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PPP1CAP62136 330 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 GRB2P62993 217 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 SARNPP82979 210 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 LINC00303Q3SY05 128 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 UNQ9165/PRO28630Q6UXU0 137 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 AKAP14Q86UN6 197 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 LRRC25Q8N386 305 aaPredicted RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 SLC25A45Q8N413 288 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PXT1Q8NFP0 134 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 OR4M2Q8NGB6 313 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 ORAOV1Q8WV07 137 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 CYGBQ8WWM9 190 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 TAMM41Q96BW9 452 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 DGCR14Q96DF8 476 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PRSS27Q9BQR3 290 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 MRPL20Q9BYC9 149 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 ASB7Q9H672 318 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 XPNPEP1Q9NQW7 623 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PARP11Q9NR21 331 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 LSM5Q9Y4Y9 91 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 S4R3C0 116 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 PCF11O94913 1555 aaKnown RBP2.6□□□□□ -1.99
C11orf88-204ENST00000529661 ROCK1Q13464 1354 aa2.6□□□□□ -1.99
C11orf88-204ENST00000529661 TUBGCP6Q96RT7 1819 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 IGLV3-12A0A075B6K2 115 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 TRAV8-3A0A0A6YYJ7 113 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 TRAV40A0A0B4J280 105 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 SMIM9A6NGZ8 99 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 CLDN24A6NM45 220 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 GYG2O15488 501 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 SCO1O75880 301 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 CIAO1O76071 339 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 IL6P05231 212 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 SNRPAP09012 282 aaKnown RBP2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF286BP0CG31 522 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 UCHL3P15374 230 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 G0S2P27469 103 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 MAGEA12P43365 314 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 CBX5P45973 191 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 H2BFSP57053 126 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 LRRC75BQ2VPJ9 315 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 C1orf195Q5TG92 126 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 GLYATQ6IB77 296 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 GALNT10Q86SR1 603 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 COMMD7Q86VX2 200 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ITPRIPQ8IWB1 547 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF101Q8IZC7 436 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 CLDN22Q8N7P3 220 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 SLC25A29Q8N8R3 303 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 TMEM161BQ8NDZ6 487 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF680Q8NEM1 530 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 OR10D3Q8NH80 312 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 RTN4IP1Q8WWV3 396 aaPredicted RBP2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ASB17Q8WXJ9 295 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 LINC00477Q96M19 166 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 TIPINQ9BVW5 301 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF717Q9BY31 904 aaPredicted RBP2.59□□□□□ -1.99
C11orf88-204ENST00000529661 MROQ9BYG7 248 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 PARVAQ9NVD7 372 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 VPS29Q9UBQ0 182 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 ZNF835Q9Y2P0 537 aa2.59□□□□□ -1.99
C11orf88-204ENST00000529661 KLF13Q9Y2Y9 288 aaPredicted RBP2.59□□□□□ -1.99
C11orf88-204ENST00000529661 PBRM1Q86U86 1689 aa2.59□□□□□ -2
C11orf88-204ENST00000529661 ANKRD30AQ9BXX3 1397 aa2.59□□□□□ -2
C11orf88-204ENST00000529661 NOS1P29475 1434 aa2.59□□□□□ -2
C11orf88-204ENST00000529661 BAZ2AQ9UIF9 1905 aaKnown RBP2.58□□□□□ -2
C11orf88-204ENST00000529661 TRIP11Q15643 1979 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 DOCK9Q9BZ29 2069 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 IGHV2-26A0A0B4J1V2 119 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 IGHV1-3A0A0C4DH29 117 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 H3BP45 60 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 TCF21O43680 179 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 IL4P05112 153 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 IL3P08700 152 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 ADORA1P30542 326 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 CCR7P32248 378 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 RAB5BP61020 215 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 NAA20P61599 178 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 MEF2CQ06413 473 aaPredicted RBP2.58□□□□□ -2
C11orf88-204ENST00000529661 MAPK14Q16539 360 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 HIST2H3PS2Q5TEC6 136 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 TMEM42Q69YG0 159 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 MORN3Q6PF18 240 aaPredicted RBP2.58□□□□□ -2
C11orf88-204ENST00000529661 SCGB1D4Q6XE38 83 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 RASSF6Q6ZTQ3 369 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 CLEC20AQ6ZU45 233 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 NEGR1Q7Z3B1 354 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 ORMDL3Q8N138 153 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 TMEM105Q8N8V8 129 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 ZIC4Q8N9L1 334 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 ST20-AS1Q8NBB2 130 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 OR6K3Q8NGY3 331 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 EEF1AKMT1Q8WVE0 214 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 DEDD2Q8WXF8 326 aa2.58□□□□□ -2
C11orf88-204ENST00000529661 TMA16Q96EY4 203 aaKnown RBP2.58□□□□□ -2
C11orf88-204ENST00000529661 RSPO3Q9BXY4 272 aaPredicted RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms