RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 FBLIM1Q8WUP2 373 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 ARPC1AQ92747 370 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 ARL11Q969Q4 196 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 FLYWCH2Q96CP2 140 aaKnown RBP6.95□□□□□ -1.3
VPS11-203ENST00000529545 NSL1Q96IY1 281 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 RAB9BQ9NP90 201 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 PARP11Q9NR21 331 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 ENOPH1Q9UHY7 261 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 MYRFQ9Y2G1 1151 aa6.95□□□□□ -1.3
VPS11-203ENST00000529545 RRP15Q9Y3B9 282 aaKnown RBP6.95□□□□□ -1.3
VPS11-203ENST00000529545 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 TMEM30CPA0ZSE6 113 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 MAGEA13PA6NCF6 341 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 ZNF736B4DX44 427 aaPredicted RBP6.94□□□□□ -1.3
VPS11-203ENST00000529545 ARPC1BO15143 372 aaKnown RBP6.94□□□□□ -1.3
VPS11-203ENST00000529545 MAGEB3O15480 346 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 RPSAP08865 295 aaKnown RBP6.94□□□□□ -1.3
VPS11-203ENST00000529545 HTR1AP08908 422 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 ARSBP15848 533 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 DAPP51397 102 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 GYS2P54840 703 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 EFNB1P98172 346 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 TMED1Q13445 227 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 RSU1Q15404 277 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 Q3ZCU0 254 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 ZNF691Q5VV52 312 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 C12orf73Q69YU5 71 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 FAHD1Q6P587 224 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 ANKRD13BQ86YJ7 626 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 SERPINA12Q8IW75 414 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 PXT1Q8NFP0 134 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 OR5D14Q8NGL3 314 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 PLPPR1Q8TBJ4 325 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 NEK7Q8TDX7 302 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 RFKQ969G6 155 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 GPER1Q99527 375 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 ZNF251Q9BRH9 671 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 DPCDQ9BVM2 203 aaPredicted RBP6.94□□□□□ -1.3
VPS11-203ENST00000529545 TOLLIPQ9H0E2 274 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 TUBA4BQ9H853 241 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 C19orf73Q9NVV2 129 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 GFOD1Q9NXC2 390 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 STUB1Q9UNE7 303 aa6.94□□□□□ -1.3
VPS11-203ENST00000529545 IGHV3-43A0A0B4J1X8 118 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 ZAR1LA6NP61 321 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 ATP6V0E1O15342 81 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 SULT1B1O43704 296 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 SLC25A17O43808 307 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 ORC5O43913 435 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 FKBP6O75344 327 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 HTR3BO95264 441 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 HLA-DRB1P01911 266 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 LGALS1P09382 135 aaKnown RBP6.93□□□□□ -1.3
VPS11-203ENST00000529545 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 CD40LGP29965 261 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 CCR9P51686 369 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 HAGHQ16775 308 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 SLC25A48Q6ZT89 311 aaKnown RBP6.93□□□□□ -1.3
VPS11-203ENST00000529545 SATL1Q86VE3 508 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 SPATA24Q86W54 205 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 Q8N1Y9 231 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 STX19Q8N4C7 294 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 SUMF2Q8NBJ7 301 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 OR10AC1Q8NH08 325 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 TNFAIP8L1Q8WVP5 186 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 LYSTQ99698 3801 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 RSRP1Q9BUV0 290 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 FAM192AQ9GZU8 254 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 CST11Q9H112 138 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 ALX4Q9H161 411 aaPredicted RBP6.93□□□□□ -1.3
VPS11-203ENST00000529545 GNG12Q9UBI6 72 aa6.93□□□□□ -1.3
VPS11-203ENST00000529545 STARD9Q9P2P6 4700 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 IGHV4OR15-8A0A075B7B6 117 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 A0A087WW49 117 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 A0A1W2PN81 502 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 DAPL1A0PJW8 107 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 C15orf65H3BRN8 121 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 SPINT2O43291 252 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 MITFO75030 526 aaPredicted RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 OR7C1O76099 320 aaPredicted RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 HSPB1P04792 205 aaKnown RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 RAB6AP20340 208 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 CALB2P22676 271 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 BLVRBP30043 206 aaPredicted RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 CHRNA7P36544 502 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 ZNF137PP52743 207 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 NANOS3P60323 173 aaKnown RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 ACTBP60709 375 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 ZNF85Q03923 595 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 TMEM267Q0VDI3 215 aaPredicted RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 LSAMPQ13449 338 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 TMEM30BQ3MIR4 351 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 PIGYQ3MUY2 71 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 LPCAT4Q643R3 524 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 STEAP3Q658P3 488 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 PYHIN1Q6K0P9 492 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 LIN54Q6MZP7 749 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms